PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG012160.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 448aa    MW: 50898 Da    PI: 9.6273
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG012160.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS353.63.1e-108554271374
              GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkf 93 
                       l++lL++cA+av+++d + a++lL++++ +a pdgd +qRla++f+e+L+arla+++  + ++l +++ s    ++ l+a++l+  +  + k+
  TRIDC5AG012160.1  55 LRTLLIHCAQAVATDDRRSATELLKQIKLHARPDGDGTQRLAHCFAEGLQARLAGTGGLVHQSLMATRIS---AVDMLKAYQLYMAAICFKKV 144
                       6789***************************************************888888777777776...9******************* PP

              GRAS  94 shltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvak 184
                       s+l  N++I++a  g++++HiiD++i++G+QWp++l+ +++Rp+gpp +RiTg++ p++g   +e++eetg+rL+k+A+e++vpfe++++++ 
  TRIDC5AG012160.1 145 SFLFSNSTIYNASLGKKKIHIIDYGIQYGFQWPCFLRRISTRPGGPPDVRITGIDLPQPGfrPRERIEETGRRLKKYANEFNVPFEYRAIATA 237
                       ***********************************************************9*****************************9999 PP

              GRAS 185 rledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpr 277
                       ++e+l+ e+L+++p+E+l+Vn+ +q ++l+desv les+rd vLk +++++P+ ++++  + + +++ F++rf e l yysalfd l+++ pr
  TRIDC5AG012160.1 238 KMESLRKEDLKIDPDEVLIVNSLFQFKNLMDESVVLESPRDVVLKNIRKMRPHTFIHAIVNGSFSAPFFVTRFREVLFYYSALFDVLDTTTPR 330
                       ********************************************************************************************* PP

              GRAS 278 eseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsv 370
                       ++e+r+ +E+ +lgr++ nv+aceg++r+er et+++W+ r ++aG+k +pl+ ++ + a+  +++++ + + ++ ++++l++gWk+r L+++
  TRIDC5AG012160.1 331 DNEQRMLIEQNILGRAALNVIACEGTDRVERPETYKQWQVRNQRAGLKLLPLNPEVIELARDKVKNCYHKDFVIDIDQHWLLQGWKGRILYAI 423
                       ********************************************************************889********************** PP

              GRAS 371 SaWr 374
                       S W+
  TRIDC5AG012160.1 424 STWT 427
                       ***6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 448 aa     Download sequence    
MFDRMLMPSD EMCIVQMQNL RIAMQEAVAK NDGGGGKGAN GKGRGRRGGS DVVDLRTLLI  60
HCAQAVATDD RRSATELLKQ IKLHARPDGD GTQRLAHCFA EGLQARLAGT GGLVHQSLMA  120
TRISAVDMLK AYQLYMAAIC FKKVSFLFSN STIYNASLGK KKIHIIDYGI QYGFQWPCFL  180
RRISTRPGGP PDVRITGIDL PQPGFRPRER IEETGRRLKK YANEFNVPFE YRAIATAKME  240
SLRKEDLKID PDEVLIVNSL FQFKNLMDES VVLESPRDVV LKNIRKMRPH TFIHAIVNGS  300
FSAPFFVTRF REVLFYYSAL FDVLDTTTPR DNEQRMLIEQ NILGRAALNV IACEGTDRVE  360
RPETYKQWQV RNQRAGLKLL PLNPEVIELA RDKVKNCYHK DFVIDIDQHW LLQGWKGRIL  420
YAISTWTAND VILLTGPICA MQVMREMG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37650.11e-155GRAS family protein