PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG012160.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 668aa    MW: 74217.1 Da    PI: 6.0324
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG012160.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS351.81.1e-1072906621374
              GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkf 93 
                       l++lL++cA+av+++d + a++lL++++ +a pdgd +qRla++f+e+L+arla+++  + ++l +++ s    ++ l+a++l+  +  + k+
  TRIDC5AG012160.2 290 LRTLLIHCAQAVATDDRRSATELLKQIKLHARPDGDGTQRLAHCFAEGLQARLAGTGGLVHQSLMATRIS---AVDMLKAYQLYMAAICFKKV 379
                       6789***************************************************888888777777776...9******************* PP

              GRAS  94 shltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvak 184
                       s+l  N++I++a  g++++HiiD++i++G+QWp++l+ +++Rp+gpp +RiTg++ p++g   +e++eetg+rL+k+A+e++vpfe++++++ 
  TRIDC5AG012160.2 380 SFLFSNSTIYNASLGKKKIHIIDYGIQYGFQWPCFLRRISTRPGGPPDVRITGIDLPQPGfrPRERIEETGRRLKKYANEFNVPFEYRAIATA 472
                       ***********************************************************9*****************************9999 PP

              GRAS 185 rledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpr 277
                       ++e+l+ e+L+++p+E+l+Vn+ +q ++l+desv les+rd vLk +++++P+ ++++  + + +++ F++rf e l yysalfd l+++ pr
  TRIDC5AG012160.2 473 KMESLRKEDLKIDPDEVLIVNSLFQFKNLMDESVVLESPRDVVLKNIRKMRPHTFIHAIVNGSFSAPFFVTRFREVLFYYSALFDVLDTTTPR 565
                       ********************************************************************************************* PP

              GRAS 278 eseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsv 370
                       ++e+r+ +E+ +lgr++ nv+aceg++r+er et+++W+ r ++aG+k +pl+ ++ + a+  +++++ + + ++ ++++l++gWk+r L+++
  TRIDC5AG012160.2 566 DNEQRMLIEQNILGRAALNVIACEGTDRVERPETYKQWQVRNQRAGLKLLPLNPEVIELARDKVKNCYHKDFVIDIDQHWLLQGWKGRILYAI 658
                       ********************************************************************889********************** PP

              GRAS 371 SaWr 374
                       S W+
  TRIDC5AG012160.2 659 STWT 662
                       ***5 PP
Sequence ? help Back to Top
Protein Sequence    Length: 668 aa     Download sequence    
GDSPSSTPED LVLPFISRIL MEEDIDDKFF YDFPDNPALI EAQQPFLEIL SDPSSNSTSD  60
DSNNRAVSPC SPSDASVGTA AQLPPTPAAV DSYDRFQFEP VDLDPAAFFG GGANSDLMSS  120
AFLKGMQEAN KFLPSQDKLV IDLEASSGQF FKGVEEGNKF LPREDKLVVG FNGHAAPASA  180
PAVLSVKKEE VVDAVSANSG GGRGRKNPYH DDELEQEGGR SSKQSALGDD VSAREMFDRM  240
LMPSDEMCIV QMQNLRIAMQ EAVAKNDGGG GKGANGKGRG RRGGSDVVDL RTLLIHCAQA  300
VATDDRRSAT ELLKQIKLHA RPDGDGTQRL AHCFAEGLQA RLAGTGGLVH QSLMATRISA  360
VDMLKAYQLY MAAICFKKVS FLFSNSTIYN ASLGKKKIHI IDYGIQYGFQ WPCFLRRIST  420
RPGGPPDVRI TGIDLPQPGF RPRERIEETG RRLKKYANEF NVPFEYRAIA TAKMESLRKE  480
DLKIDPDEVL IVNSLFQFKN LMDESVVLES PRDVVLKNIR KMRPHTFIHA IVNGSFSAPF  540
FVTRFREVLF YYSALFDVLD TTTPRDNEQR MLIEQNILGR AALNVIACEG TDRVERPETY  600
KQWQVRNQRA GLKLLPLNPE VIELARDKVK NCYHKDFVID IDQHWLLQGW KGRILYAIST  660
WTANDASS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07530.11e-158GRAS family protein