PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG012160.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

GRAS

Protein Properties

Length: 143aa MW: 16620 Da PI: 7.5062

Description

GRAS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG012160.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GRAS	119.5	4.2e-37	10	137	247	374
GRAS 247 dhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqakl 339 + +++ F++rf e l yysalfd l+++ pr++e+r+ +E+ +lgr++ nv+aceg++r+er et+++W+ r ++aG+k +pl+ ++ + a+ TRIDC5AG012160.3 10 SFSAPFFVTRFREVLFYYSALFDVLDTTTPRDNEQRMLIEQNILGRAALNVIACEGTDRVERPETYKQWQVRNQRAGLKLLPLNPEVIELARD 102 557789************************************************************************************* PP GRAS 340 llrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374 +++++ + + ++ ++++l++gWk+r L+++S W+ TRIDC5AG012160.3 103 KVKNCYHKDFVIDIDQHWLLQGWKGRILYAISTWT 137 **889***********************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 143 aa Download sequence
TFIHAIVNGS FSAPFFVTRF REVLFYYSAL FDVLDTTTPR DNEQRMLIEQ NILGRAALNV 60 IACEGTDRVE RPETYKQWQV RNQRAGLKLL PLNPEVIELA RDKVKNCYHK DFVIDIDQHW 120 LLQGWKGRIL YAISTWTAND ASS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G29065.1	1e-59	GRAS family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG012160.3