PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG012320.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB
Protein Properties Length: 329aa    MW: 38227.7 Da    PI: 10.1595
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG012320.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding49.21.2e-15958148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT..TTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg..kgRtlkqcksrwqkyl 48
                      r+rW +eEd +l  +v+q+G++ W+++a++m+  + R +k+c +rw +yl
  TRIDC5AG012320.3  9 RQRWRPEEDAILRSYVRQYGPREWNLVAQRMNvpLDRDAKSCLERWKNYL 58
                      89**********************************************97 PP
2Myb_DNA-binding34.16.1e-1164108147
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                       +g+ T +E+ l +++ +++G++ Wk+Ia++++ gRt+k +  +w  +
  TRIDC5AG012320.3  64 KGSLTDDEQRLVIRLQAKHGNK-WKKIAAEVP-GRTAKRLGKWWEVF 108
                       57789*****************.*********.*****999999766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 329 aa     Download sequence    
QVRMEMKERQ RWRPEEDAIL RSYVRQYGPR EWNLVAQRMN VPLDRDAKSC LERWKNYLRP  60
GIKKGSLTDD EQRLVIRLQA KHGNKWKKIA AEVPGRTAKR LGKWWEVFKE KQQREIRDSR  120
RPPPEPSPDE RGRYEWLLEN FAEKLVKERQ QVGVGATPLH HHHLMAAPML PPWMSSTAAN  180
GAPVSPAPPS PPPAPGMVAD APQAALAELA ECCRELDEGH RAWAAHRKEA SWRLKRVELQ  240
LESERACRRR EAAEEFEAKM RALWEEQAAA VERLEAEYRE KVAGLRRDAE LKEQKMAEQW  300
AAKHARLTKF LEQVGSSCRR WPPGEMNGR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37630.16e-68MYB family protein