PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG013020.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family WOX
Protein Properties Length: 186aa    MW: 20677.4 Da    PI: 11.6278
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG013020.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox60.13.5e-1943102357
                       --SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
          Homeobox   3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 
                        R+t+tkeq+ +Le l+++  r+p+ae++++ +++l     ++ ++V++WFqN++a++++
  TRIDC5AG013020.1  43 ARWTPTKEQVSVLEGLYRQgLRTPTAEQIQQVTARLqkhgPIEGKNVFYWFQNHKARQRQ 102
                       7*****************99****************99999*****************97 PP
2Wus_type_Homeobox111.16e-3642104365
  Wus_type_Homeobox   3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 
                        ++RWtPt+eQ+ +Le ly++GlrtP++e+iq++ta+L+++G ie+kNVfyWFQN+kaR+rq+q
   TRIDC5AG013020.1  42 NARWTPTKEQVSVLEGLYRQGLRTPTAEQIQQVTARLQKHGPIEGKNVFYWFQNHKARQRQRQ 104
                        78***********************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 186 aa     Download sequence    
SLAAMESVEH QQQAAARSPP HAAAPPSPPL SPNSAAAAAL ANARWTPTKE QVSVLEGLYR  60
QGLRTPTAEQ IQQVTARLQK HGPIEGKNVF YWFQNHKARQ RQRQKQQAFD YFSKQFRRPQ  120
PLPVLHRPAA HPSLPPIPLH PPPHVPSATT PDPPAPPACN RQGTRTLRRH MNHPPPRSFG  180
TYVLTD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G59340.12e-23WOX family protein