PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG013370.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 287aa MW: 32704.2 Da PI: 5.7942

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG013370.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56.3	7.3e-18	59	106	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT eEd+ lv++++ +G ++W++ ar g++Rt+k+c++rw++yl TRIDC5AG013370.3 59 RGPWTVEEDLTLVNYIADHGDDRWNSLARAAGLKRTGKSCRLRWLNYL 106 89********************************************97 PP
2	Myb_DNA-binding	55.7	1.1e-17	112	155	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg++T++E++l++d++ ++G++ W++Ia++++ gRt++++k++w++ TRIDC5AG013370.3 112 RGNFTADEQLLILDLHSRWGNR-WSKIAQHLP-GRTDNEIKNYWRT 155 89******************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 287 aa Download sequence
WLSLRPSLSL ELEKGRENMA SWSSSSTQRS SGATMPCSVV KLDDDLLHHE EETAEEIRRG 60 PWTVEEDLTL VNYIADHGDD RWNSLARAAG LKRTGKSCRL RWLNYLRPDV KRGNFTADEQ 120 LLILDLHSRW GNRWSKIAQH LPGRTDNEIK NYWRTRVQKH AKQLNCDANS TKFKDAMKYL 180 WMPRLADHHL QQASTVGDHL VPGPPTAYME SSGMVTSSSD SFASESYDGA RCANASVGEM 240 IHSGDWVQEQ NQGFWPETNQ NFQLQDSELS GWVQGFSESD SLAENFW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G48000.1	2e-76	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG013370.3