PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG013780.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 1063aa    MW: 116156 Da    PI: 6.8423
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG013780.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B346.56.5e-151972801499
                       T-EE--HHH.HTT---..--SEEEEEE.TTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EEEEE-S CS
                B3  14 grlvlpkkfaeehggkkeesktltled.esgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvvkvfrk 99 
                       + +++pk++a+ h   ++es t+tl++  ++++W  ++   kk+ ++ lt+ W +Fv++n++ egD+++F   +  + f ++v+++rk
  TRIDC5AG013780.2 197 SYVTIPKEYAAVHF--PPESATITLRSpGKNKKWHPRF--YKKGTMIKLTGSWLHFVRDNDVHEGDICIFVPAKGgKPFMFTVHLLRK 280
                       4589******9998..45789******5566*******..9999***************************77655999999999987 PP
2B351.61.7e-16337432399
                       EE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE.. CS
                B3   3 kvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefel 92 
                       +++t+s+ ++++ + l+k++a+eh   +++++tl+++   g+ W++++ +  rk+++r +l +GW++F ++n L+ gD+++F+l+++ +e + 
  TRIDC5AG013780.2 337 SIMTKSNLGSRH-MELSKRYAAEHL--PHRNVTLMFQY-MGKIWNINMLFhdRKYPKRWYLIGGWSKFISDNSLRLGDICLFELKKDeKELTV 425
                       567777777777.***********5..34677888776.9********9999******99999**********************99899999 PP

                       EEEEE-S CS
                B3  93 vvkvfrk 99 
                        v+++rk
  TRIDC5AG013780.2 426 IVHLLRK 432
                       9999887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 1063 aa     Download sequence    
SSFLPRPLFF VRCRRRAGGP SLACIHMYQT PTYPGGAEGA VPSSLMDTPL TEERRAARRV  60
RRRVCSSGSP TSLNHGESDD AQEMSTNSTE ISSSDCYTQL SSESSDEGCE NRSSGHRRKR  120
RKTSVISSAS EQSGQDSPSA CESLESDDVQ ITPGKDYVLP QRCDLSDAEK NRVVVLIKEI  180
KAKVTVFVAI MLRSYSSYVT IPKEYAAVHF PPESATITLR SPGKNKKWHP RFYKKGTMIK  240
LTGSWLHFVR DNDVHEGDIC IFVPAKGGKP FMFTVHLLRK ETTDSQTEVS HESSECEDSH  300
GQPPYILPYG ARLSPSQRSA VKKKVDSIQS EVPIYVSIMT KSNLGSRHME LSKRYAAEHL  360
PHRNVTLMFQ YMGKIWNINM LFHDRKYPKR WYLIGGWSKF ISDNSLRLGD ICLFELKKDE  420
KELTVIVHLL RKESIDHPSG VSPVLDSNYV RASTMIASTV RVGEEPDDEE ETASSGREEQ  480
GFDDEPIEHN YSEGASKAHM PTAPCSESNV SGISLSPEAR EQAAGCSNKS FATEFPNKPS  540
STMEHNRIIH TDRAAASEVI GLSDYRIHNS CDSIDSQGGE SLAVQQQSSP SPGIGNSVNL  600
DSSSCDHRSA EHVEGESDVA LQSSVRVTGQ QVGDAEKEVN ASGGENTLAD LPHLEPQNVA  660
AVPTQAALPM PKEKTDTQTN RSAQSDVAQA QPPQGEVEQA GLSGVATPQP LQPEMQASLS  720
REVEAPANVV IQSAQPLVLE MQPSTPLSNI PLERTHPNRG QSSRQPEAAA GSAQPAQLFP  780
APSMMFNHPP IGDEPLKNEL HRLRLHIDSL DKIYELKQSQ LQTECSQEIE KIKQKYDLLL  840
EERDSVHLEQ MKTLDGLLEK VVFHQSLAAD FRAKFISSSA AQAKAYSRPI HQTPQASQQA  900
PMRPPGVTST SPPAAWSSAG RPVVPGGAQP SQVDRPSTPA SSQAPRPPLP FPQVVRPPIN  960
PGNLVRTTGA PTSHMPRGPP RGGHGVPSAP APHLQRRLPP WAHSTSPANQ RQQQQHATSV  1020
SSQSSHAVPP VSSSPLPPSR SQATHHGSST RMDVDVVCLS DDE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31640.13e-09B3 family protein