PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG015560.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 393aa MW: 42430.3 Da PI: 7.3013

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG015560.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	48.3	2.3e-15	36	83	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEde+lv + + G g+W+ +ar g+ R++k+c++rw +yl TRIDC5AG015560.1 36 KGLWSPEEDERLVAYMLRSGQGSWSDVARNAGLQRCGKSCRLRWINYL 83 678*******************************************97 PP
2	Myb_DNA-binding	51.6	2.1e-16	89	132	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+++++E++l+v++++ lG++ W+ Ia++++ gRt++++k++w++ TRIDC5AG015560.1 89 RGAFSPQEEDLIVNLHAILGNR-WSQIAARLP-GRTDNEIKNFWNS 132 89******************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 393 aa Download sequence
SGRAMRKPVE CPATKCSGGA APGNSNVAAA AAKLRKGLWS PEEDERLVAY MLRSGQGSWS 60 DVARNAGLQR CGKSCRLRWI NYLRPDLKRG AFSPQEEDLI VNLHAILGNR WSQIAARLPG 120 RTDNEIKNFW NSTIKKRLKM NSAASSPATT ECASPREPKL DGGSASCLDL TSLEDGSHHG 180 MKSMWRMDSS SSSSSSSSIQ QSRPSTMAPA ANRGYGGLLL PLPDQFCGVA PSTHTSVPPF 240 FHDHSSFKQV SPLRAGGYYP HGMAMEGGGG SCFTGEEAVG GGGEHSVLFN VPPLLEPMAV 300 ALQDQTLMAS TGNSDNNHRN TNSTAEGTTL SSKNGCNIND DNNSKNNINS VVSYWEQHGH 360 QQHMSRNVVM GEWDLEELMK DVSCLPFLDF QVE

Sequence ? help Back to Top

Protein Sequence Length: 393 aa Download sequence

SGRAMRKPVE CPATKCSGGA APGNSNVAAA AAKLRKGLWS PEEDERLVAY MLRSGQGSWS  60
DVARNAGLQR CGKSCRLRWI NYLRPDLKRG AFSPQEEDLI VNLHAILGNR WSQIAARLPG  120
RTDNEIKNFW NSTIKKRLKM NSAASSPATT ECASPREPKL DGGSASCLDL TSLEDGSHHG  180
MKSMWRMDSS SSSSSSSSIQ QSRPSTMAPA ANRGYGGLLL PLPDQFCGVA PSTHTSVPPF  240
FHDHSSFKQV SPLRAGGYYP HGMAMEGGGG SCFTGEEAVG GGGEHSVLFN VPPLLEPMAV  300
ALQDQTLMAS TGNSDNNHRN TNSTAEGTTL SSKNGCNIND DNNSKNNINS VVSYWEQHGH  360
QQHMSRNVVM GEWDLEELMK DVSCLPFLDF QVE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G08500.1	4e-66	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG015560.1