PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG016560.11
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family C2H2
Protein Properties Length: 336aa    MW: 37886.8 Da    PI: 4.4544
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG016560.11genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.90.00034304323322
                        ETTTTEEESSHHHHHHHHHH CS
            zf-C2H2   3 CpdCgksFsrksnLkrHirt 22 
                        C+ Cg +F ++s L +H+  
  TRIDC5AG016560.11 304 CETCGDTFESRSKLFSHLEE 323
                        *****************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 336 aa     Download sequence    
MAYQEPEWAR VDEIELAFEE EDDEETREKA KEELYCVACN KKFKSEKQWK NHEQSRKHKD  60
KVADLRMAFK EEEEALKEAE EEAGGEWEEV DVGFDFKPAN ESEESDWSDA AEELAEELDE  120
GLEVADEDNG NKDFNNGEQE VGSYDETSVL EAMLSSRKNK KSGYVVPQEE APSVVTEDDN  180
SEDRNSEVKS VKKKGRRRRA SKKGQDEGSY ADSGHGMKND VPYEESVHDN DENDADDKAE  240
GPPTSNDDGT SASVGSQQNE KTDNPKKNKK NKKGAEKKTT VSADLKFTSK GKKQKEVSKA  300
SNDCETCGDT FESRSKLFSH LEETGHAVIK ARQKKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G74250.12e-15C2H2 family protein