PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG016560.12

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

C2H2

Protein Properties

Length: 242aa MW: 26660.5 Da PI: 4.631

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG016560.12	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.5	0.00022	210	229	3	22
ETTTTEEESSHHHHHHHHHH CS zf-C2H2 3 CpdCgksFsrksnLkrHirt 22 C+ Cg +F ++s L +H+ TRIDC5AG016560.12 210 CETCGDTFESRSKLFSHLEE 229 *****************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 242 aa Download sequence
DFKPANESEE SDWSDAAEEL AEELDEGLEV ADEDNGNKDF NNGEQEVGSY DETSVLEAML 60 SSRKNKKSGY VVPQEEAPSV VTEDDNSEDR NSEVKSVKKK GRRRRASKKG QDEGSYADSG 120 HGMKNDVPYE ESVHDNDEND ADDKAEGPPT SNDDGTSASV GSQQNEKTDN PKKNKKNKKG 180 AEKKTTVSAD LKFTSKGKKQ KEVSKASNDC ETCGDTFESR SKLFSHLEET GHAVIKARQK 240 KR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G74250.1	2e-08	C2H2 family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG016560.12