PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG017230.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

C2H2

Protein Properties

Length: 1506aa MW: 168509 Da PI: 7.3132

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG017230.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.1	0.0006	1387	1410	1	22
EEET..TTTEEESSHHHHHHHHHH CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt 22 ++C C++sFs++ +L H r TRIDC5AG017230.3 1387 FPCDieGCDMSFSSQQDLLLHKRD 1410 789999***************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 1506 aa Download sequence
QRSRFPKSPP TCNSSPEETL PYSAAAVAAM SLPPVDPPEW LRTLPVAPEY RPTLAEFADP 60 IAYILKIEPE ASRYGICKIV PPLPSPPREA TVQLLKASFA SNAAASASGD AGPTFPTRLQ 120 QVGLSTKNRR GANRRVWESG ERYTLEAFRT KARDFELPRH AIPPKHATPL QLEALFWGAC 180 AARPFSVEYG NDMPGSGFVK REVPDLDTDS PVAAPRDVGE TEWNMRVAPR ARGSLLRGMS 240 RDVAGVTTPM LYVAMLYSWF AWHVEDHELH SLNYLHFGKP KTWYGVPRDA MLAFEDAVRV 300 HGYADDLNAI MAFQTLNQKT TVLSPEVLLS VGVPCCRLVQ NPGEFVITFP GAYHCGFSHG 360 FNCGEATNIA TPLWLQVAKE AAIRRASTNC GPMISHYQLL YELALSLSQR EPKDFHTLPR 420 SSRLRDKKKK DEGDTMVKEK FVGSVIENNN LLSILLDKSS CIIVPETPFP PTSFPTMMEP 480 ELTVKQSLTG GHCSISQQAV HNMSVDVALD KSIVVENMSH SQSVTEASLS AYNRRKLYET 540 KYGELGTAAF CLSPSKLQSG VTDKDKRGGL LDQGRLPCVQ CGILSFACVA IIQPREAAVQ 600 FVLSREGISS SAKPGEVSES DGISNWITNN IEMVPQQGQA SEALTVSLAH VSDRCGQLYS 660 RNNNGSTSAL GLLASTYGSS DSEEESNQGK NNQLLETSVS FSSTVQRQRS NSHLYEECCE 720 AKTTTSLLKS IEDNSTTITR CGRDTDINHL AKLREQGTTY DQCSVYVDLA NDLTISGVKA 780 YSDTHVTTAK SSIEPDVLTQ LKYNNDSCRM HVFCLEHALG TWTQLQKIGG ANVMLLCHPE 840 YPRAESAAKF IAEELGLKPD WKDVAFEEAT DDDIRRIQLA LHDEDAEPAS NDWAVKMGIN 900 IYYSAKQSKS PLYSKQIPYN SIIYEAFGQE NPDNLTDYGR QRSGVTKKRV AGCWCGKVWM 960 SNQVHPFLVR EHEEHNRAIV CSKVMLGANY HEIVYDEPSL TCNTMVNCSP SKRISRRKGR 1020 DSIEKSGARK KRCSANDEAT LHCSSLGMNS KTISDQPRNF DDHDKHEGGK ITEAPSTQQY 1080 QQYTLQSMNM KSSSNKPKDD KGNRNFLDLY DEANDVDCWF NIDSGDNAAI RHLEDSRQQE 1140 LGTVKAKSPG KLQGNMRKSS KCKARDDSLN GDKKVQKMNK KSISRKQKDV EINTQFREEY 1200 DEDNNWEEVP EGKDHDVKVE SRAKTRSGED NKRNNNSHEL HDEDNDMDCW HDIHGRDNAT 1260 MGNLDNSPVQ RLEAAEVKSG GKLHCCKRKS SKGKAKDDYS YGDEKLQMLN IESISRKQKS 1320 DSQFDEGCDR DNALDSLLND VDEAARENCY EVREEEMDGM EVKPRGKMQT GKRKTSRCQA 1380 GDKAAKFPCD IEGCDMSFSS QQDLLLHKRD ICPVKGCKKK FFCHKYLLQH RKVHMDERPL 1440 NCEWKGCKKT FKWPWARTEH MRVHTGVRPY ECMVPGCGQT FRFVSDFSRH KRKTGHSSGK 1500 KNKEST

Sequence ? help Back to Top

Protein Sequence Length: 1506 aa Download sequence

QRSRFPKSPP TCNSSPEETL PYSAAAVAAM SLPPVDPPEW LRTLPVAPEY RPTLAEFADP  60
IAYILKIEPE ASRYGICKIV PPLPSPPREA TVQLLKASFA SNAAASASGD AGPTFPTRLQ  120
QVGLSTKNRR GANRRVWESG ERYTLEAFRT KARDFELPRH AIPPKHATPL QLEALFWGAC  180
AARPFSVEYG NDMPGSGFVK REVPDLDTDS PVAAPRDVGE TEWNMRVAPR ARGSLLRGMS  240
RDVAGVTTPM LYVAMLYSWF AWHVEDHELH SLNYLHFGKP KTWYGVPRDA MLAFEDAVRV  300
HGYADDLNAI MAFQTLNQKT TVLSPEVLLS VGVPCCRLVQ NPGEFVITFP GAYHCGFSHG  360
FNCGEATNIA TPLWLQVAKE AAIRRASTNC GPMISHYQLL YELALSLSQR EPKDFHTLPR  420
SSRLRDKKKK DEGDTMVKEK FVGSVIENNN LLSILLDKSS CIIVPETPFP PTSFPTMMEP  480
ELTVKQSLTG GHCSISQQAV HNMSVDVALD KSIVVENMSH SQSVTEASLS AYNRRKLYET  540
KYGELGTAAF CLSPSKLQSG VTDKDKRGGL LDQGRLPCVQ CGILSFACVA IIQPREAAVQ  600
FVLSREGISS SAKPGEVSES DGISNWITNN IEMVPQQGQA SEALTVSLAH VSDRCGQLYS  660
RNNNGSTSAL GLLASTYGSS DSEEESNQGK NNQLLETSVS FSSTVQRQRS NSHLYEECCE  720
AKTTTSLLKS IEDNSTTITR CGRDTDINHL AKLREQGTTY DQCSVYVDLA NDLTISGVKA  780
YSDTHVTTAK SSIEPDVLTQ LKYNNDSCRM HVFCLEHALG TWTQLQKIGG ANVMLLCHPE  840
YPRAESAAKF IAEELGLKPD WKDVAFEEAT DDDIRRIQLA LHDEDAEPAS NDWAVKMGIN  900
IYYSAKQSKS PLYSKQIPYN SIIYEAFGQE NPDNLTDYGR QRSGVTKKRV AGCWCGKVWM  960
SNQVHPFLVR EHEEHNRAIV CSKVMLGANY HEIVYDEPSL TCNTMVNCSP SKRISRRKGR  1020
DSIEKSGARK KRCSANDEAT LHCSSLGMNS KTISDQPRNF DDHDKHEGGK ITEAPSTQQY  1080
QQYTLQSMNM KSSSNKPKDD KGNRNFLDLY DEANDVDCWF NIDSGDNAAI RHLEDSRQQE  1140
LGTVKAKSPG KLQGNMRKSS KCKARDDSLN GDKKVQKMNK KSISRKQKDV EINTQFREEY  1200
DEDNNWEEVP EGKDHDVKVE SRAKTRSGED NKRNNNSHEL HDEDNDMDCW HDIHGRDNAT  1260
MGNLDNSPVQ RLEAAEVKSG GKLHCCKRKS SKGKAKDDYS YGDEKLQMLN IESISRKQKS  1320
DSQFDEGCDR DNALDSLLND VDEAARENCY EVREEEMDGM EVKPRGKMQT GKRKTSRCQA  1380
GDKAAKFPCD IEGCDMSFSS QQDLLLHKRD ICPVKGCKKK FFCHKYLLQH RKVHMDERPL  1440
NCEWKGCKKT FKWPWARTEH MRVHTGVRPY ECMVPGCGQT FRFVSDFSRH KRKTGHSSGK  1500
KNKEST

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	425	431	RDKKKKD
2	1016	1032	RRKGRDSIEKSGARKKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G48430.1	0.0	C2H2 family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG017230.3