PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG019660.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 409aa MW: 42939.2 Da PI: 8.5795

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG019660.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	38.8	1.6e-12	338	383	6	55
HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +++Er RR +i +++ +L+el+P+ k + +++L +Av+YIk+Lq TRIDC5AG019660.1 338 SIAERVRRTKISERIRKLQELVPNM----EKQTNTSDMLDLAVDYIKELQ 383 689*******************6....4679**************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 409 aa Download sequence
MYGAPLSKDL NLPAQLQPAA NGVRTPPQMS SPGLLRYRSA PSAMFGDVCG DFLPASAGAG 60 AGHRQGSPDH AADTGFARLL SGHHHQQHHP EMRDKPPRPA ASHFTEDPAA ASMASQQQQQ 120 LMYQSQQQMA AMEGLFRTAS SGATDPVAAG NDSLLRQSSS PAGCVNHLNM DNGYGSMLRA 180 GMAGAGGGGY RNGDARLKGQ LSFSSRQGSV MSQISEMVGE EMGGGGSSGD DEAGSNGAGY 240 GGIPGYPVVA PSAAAGWDEP SPSPSPSLLS SDGMSGPAAK RRPRDGAARQ VKPQFSLPAG 300 SKPSPSPEIA AIEKFLQFQD SVPCKIRAKR GCATHPRSIA ERVRRTKISE RIRKLQELVP 360 NMEKQTNTSD MLDLAVDYIK ELQMQVKVRM DNAAICVAVC ARGSSPEML

Sequence ? help Back to Top

Protein Sequence Length: 409 aa Download sequence

MYGAPLSKDL NLPAQLQPAA NGVRTPPQMS SPGLLRYRSA PSAMFGDVCG DFLPASAGAG  60
AGHRQGSPDH AADTGFARLL SGHHHQQHHP EMRDKPPRPA ASHFTEDPAA ASMASQQQQQ  120
LMYQSQQQMA AMEGLFRTAS SGATDPVAAG NDSLLRQSSS PAGCVNHLNM DNGYGSMLRA  180
GMAGAGGGGY RNGDARLKGQ LSFSSRQGSV MSQISEMVGE EMGGGGSSGD DEAGSNGAGY  240
GGIPGYPVVA PSAAAGWDEP SPSPSPSLLS SDGMSGPAAK RRPRDGAARQ VKPQFSLPAG  300
SKPSPSPEIA AIEKFLQFQD SVPCKIRAKR GCATHPRSIA ERVRRTKISE RIRKLQELVP  360
NMEKQTNTSD MLDLAVDYIK ELQMQVKVRM DNAAICVAVC ARGSSPEML

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42280.1	8e-46	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG019660.1