PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG020500.6
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family C3H
Protein Properties Length: 242aa    MW: 26612.1 Da    PI: 9.1605
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG020500.6genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH31.33.5e-10115137426
                       ---SGGGGTS--TTTTT-SS-SS CS
           zf-CCCH   4 elCrffartGtCkyGdrCkFaHg 26 
                       + C +++++GtC++G +CkF+H+
  TRIDC5AG020500.6 115 PDCTYYLKFGTCRFGMKCKFNHP 137
                       89********************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 242 aa     Download sequence    
PTCSRRRRYL SLSPRRRMAD ADAKAPPKSN LDADLIASIS PSSNSSGARN AVAIESQFAD  60
LAISDELPKP SGWGDDAVLG IAGSDEITGE ITGGKVQPVA TADSRPRFPQ RHAEPDCTYY  120
LKFGTCRFGM KCKFNHPARK KKNRVKASGS SSSGSNDISN KAFPPDDDQT PKEEYEDLVP  180
NISAEVDLLK GRMEAMQLKI ADETEKGFYL KKFKETEQKV YKFLHFKLAP CSTGLIVPLQ  240
RP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G02830.16e-11C3H family protein