PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG020650.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

TCP

Protein Properties

Length: 403aa MW: 41740.6 Da PI: 6.106

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG020650.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	130.8	1.3e-40	99	216	2	112
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg..... 88 a +k++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++tieWLlqqa+pai ++tgt++++a+++ + s+ s+ + TRIDC5AG020650.1 99 ALAKRPSKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAILAATGTGTIPANFSsLNISRAASGT----Srpapf 187 5689*****************************************************************88843334333333....222346 PP TCP 89 .....kaaksaakskksqksaasalnlak 112 + +++s ++q++ +++l +++ TRIDC5AG020650.1 188 palalHPHHPHHQSPHPQHDMSTMLGYHH 216 66555333333344444444444554444 PP

Sequence ? help Back to Top
Protein Sequence Length: 403 aa Download sequence
GGSGGGGSGG GGGCGAPSSS NSGGGSAGGT SGSRGGGSDH HPHHPFYYAG PAEPNNVQQQ 60 PQPQQFIGSL AITPVVTDQA PASSAEKKAV APVTPSAGAL AKRPSKDRHT KVDGRGRRIR 120 MPALCAARVF QLTRELGHKS DGETIEWLLQ QAEPAILAAT GTGTIPANFS SLNISRAASG 180 TSRPAPFPAL ALHPHHPHHQ SPHPQHDMST MLGYHHLLPP PQEPPQDANS PGSFMRKRYR 240 EDLFKEDDER QDPNAPKARE QQAAPPAAMW AVAPNSAAPG GAFWMLPVSA SQAAAVRPTE 300 QPMWSFGGGG GSSTVQAPLQ FMSTRVNYPG SAGAMGGMPD TNIGMLAGLN AYDRGGGGGG 360 GTEEEQQQQQ QQQEQDQQQE MEQQRDGSGG GNEGEEDGDD DSG

Sequence ? help Back to Top

Protein Sequence Length: 403 aa Download sequence

GGSGGGGSGG GGGCGAPSSS NSGGGSAGGT SGSRGGGSDH HPHHPFYYAG PAEPNNVQQQ  60
PQPQQFIGSL AITPVVTDQA PASSAEKKAV APVTPSAGAL AKRPSKDRHT KVDGRGRRIR  120
MPALCAARVF QLTRELGHKS DGETIEWLLQ QAEPAILAAT GTGTIPANFS SLNISRAASG  180
TSRPAPFPAL ALHPHHPHHQ SPHPQHDMST MLGYHHLLPP PQEPPQDANS PGSFMRKRYR  240
EDLFKEDDER QDPNAPKARE QQAAPPAAMW AVAPNSAAPG GAFWMLPVSA SQAAAVRPTE  300
QPMWSFGGGG GSSTVQAPLQ FMSTRVNYPG SAGAMGGMPD TNIGMLAGLN AYDRGGGGGG  360
GTEEEQQQQQ QQQEQDQQQE MEQQRDGSGG GNEGEEDGDD DSG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G35560.1	2e-49	TCP family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG020650.1