PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG021390.9
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family E2F/DP
Protein Properties Length: 258aa    MW: 28322.1 Da    PI: 5.2175
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG021390.9genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP84.39.9e-2791156171
           E2F_TDP   1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 
                       r+++sL+llt+kfl+ll+ ++ g+v+ln++a++L   +v  ++RRiYDi+NVLe+++liekk kn+irwkg
  TRIDC5AG021390.9  91 RYDSSLGLLTKKFLNLLKGAPGGMVDLNNAAETL---EV--QKRRIYDITNVLEGIGLIEKKLKNNIRWKG 156
                       6899******************************...99..****************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 258 aa     Download sequence    
GTAEMTEAVV LRTPLKRKHN REDNEVAESN DWMMSPGYAN AANSPIPTPP SGKGSKMSAK  60
PKAAKGQKSC PQTPLFSGSP GNPATPVGGC RYDSSLGLLT KKFLNLLKGA PGGMVDLNNA  120
AETLEVQKRR IYDITNVLEG IGLIEKKLKN NIRWKGIDDS RPGEVSDDMS ILQGDIEALT  180
LQEHSLDGQI SEMRDKLREL TEDENNQKWL YVTEDDIKSL PCFQNQTLIA IKAPHGTTLE  240
VPDPDEVSIN NMFVTFRT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36010.11e-82E2F/DP family protein