PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG021560.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 229aa    MW: 26309.5 Da    PI: 10.5491
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG021560.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B394.86e-3036141198
                       EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr 87 
                       f+k ltpsdv+k++rlv+pk++ae++      +++ e++  l++ede g+ W+++++y+ +s++yvltkGW+++vk+++L++gD+v F++++ 
  TRIDC5AG021560.4  36 FEKPLTPSDVGKLNRLVIPKQHAERYfplnggDSPGEKDLLLSFEDEAGKPWRFRYSYWTSSQSYVLTKGWSRYVKEKQLDAGDIVHFERVRG 128
                       99****************************87445557778999*********************************************8865 PP

                       ..SEE..EEEEE- CS
                B3  88 ..sefelvvkvfr 98 
                         ++ +l+++ +r
  TRIDC5AG021560.4 129 lgTGDRLFIGCRR 141
                       5455556666555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 229 aa     Download sequence    
MAMHPLSQGH PQAWPWGVAM YTNLHYHHQY EREHLFEKPL TPSDVGKLNR LVIPKQHAER  60
YFPLNGGDSP GEKDLLLSFE DEAGKPWRFR YSYWTSSQSY VLTKGWSRYV KEKQLDAGDI  120
VHFERVRGLG TGDRLFIGCR RRGESAPPPP VRVPPPALNA GEQQPWSPMC YSTSGSYPTS  180
PANSYAYRRS ASRRERQTPR AARHRRRRRD VSGCSASTST AVRSQRQRQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36080.21e-54B3 family protein