PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG021570.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NAC

Protein Properties

Length: 249aa MW: 27052.2 Da PI: 9.9594

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG021570.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	127.5	1e-39	18	158	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkk.leleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkd 89 +pGfrF Pt++el+ +yL+++++g++ ++++vi+ vd+y+++P++L++ + ++ ++w+fF++r++++ +g r+ r+t sgyWkatg+ TRIDC5AG021570.2 18 TPGFRFYPTEDELLGFYLRHRLAGTTrPHVDRVIPVVDVYSHHPSHLRSmageASVQDAEQWFFFCPRAERELRGGRPARTTPSGYWKATGSP 110 69*******************9995666678**********8434532223566***************************** PP NAM 90 kevlsk.........kgelvglkktLvfykgrapkgektdWvmheyrl 128 v+s+ +++++g+k+t+vfy+grap+g kt+W m+ey++ TRIDC5AG021570.2 111 SCVFSSsssssaaagNSKVIGVKRTMVFYQGRAPTGAKTTWKMNEYKA 158 998888887777777*************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 249 aa Download sequence
MMTTTSSGGA GGDLLVSTPG FRFYPTEDEL LGFYLRHRLA GTTRPHVDRV IPVVDVYSHH 60 PSHLRSMAGE ASVQDAEQWF FFCPRAEREL RGGRPARTTP SGYWKATGSP SCVFSSSSSS 120 SAAAGNSKVI GVKRTMVFYQ GRAPTGAKTT WKMNEYKAVA ADDDTTTGHQ TTAPLRLRNE 180 FSVCRLYIST GTLRSFDRRP LNTSGNGQAA ARRHAPSAAN TASIGQADNY QGWSTILGAR 240 PTFWCSSLD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G22380.1	6e-69	NAC family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG021570.2