PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG023050.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 740aa MW: 81844.2 Da PI: 5.8694

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG023050.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	44.1	6.7e-14	194	272	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fYn Y+ e+GF +r ks+++++ g +++ +C + gk++ k+ r++C+a +++ +++d+ w+vt+ ++ HnH+++ TRIDC5AG023050.2 194 DFYNLYSWEMGFGIRYGKSRRNTKGG-KCMQEITCVNAGKPNMGGKS----------RRCECTALIRLLRTDDNGWYVTQHRKVHNHAFS 272 6*******************8777.66789******98877..........9***************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 740 aa Download sequence
MEFSVEEEPR SGAPLALGLG EDAMEAVRRA FPGQDFAIDV VNRAFGRRNP AERSQQDSSA 60 CGISGACTSE KPMDLEQVEN AGKSCAQQDP SASEMQLRSQ EVEQAGQRCD APPAPADVGT 120 EAGGPPAPAD VGAEAGGGWN RRVRRGRIPD EREPDAQRVS ALEKALTGFA ERQTDVVVNP 180 TVGTCFDSIT EAYDFYNLYS WEMGFGIRYG KSRRNTKGGK CMQEITCVNA GKPNMGGKSR 240 RCECTALIRL LRTDDNGWYV TQHRKVHNHA FSTTYGNKVH WPSHKHLDKY TRDLVRQLRH 300 NNVNLGVYDT IASFFGRMEN VPFNKRSIRT LCGEVIREQA VDDARKTMET AAASGERPEN 360 HTGEETTFNC MGLASTTVGS PNMPVEPLRY PEQDDTHSNA EAGRLADLLL AFGDCHLVLK 420 SCTYDDLINS NGTMSGLEEA VKAVTPHLQQ GIFGDLWSRA HNSGGVVSAQ VLTIKDLFRF 480 TRWLTTTTGQ HNLRCVQQRA KLVNSGKAVL EPEQIALLHL YQAENDEYSV KMNKLQGERD 540 AKIAHYMAKI DEARKSFEVS IQAAKQHYPV SASYVALDSN ELRAQCWTMY LAQCRKEAKD 600 LNAKASNIVE KYGPEVIQRH LFEFCSQETN RQALLKYAQT KVNNLKEAGD ARGEDTLHDY 660 MTLLDIEKAY ALLAAEEQIA NCPDTCGGSE DADRGNINNI IARGEAADGA RGDGQDGGEG 720 ASEGPPRQKR QRNDQDYVWW

Sequence ? help Back to Top

Protein Sequence Length: 740 aa Download sequence

MEFSVEEEPR SGAPLALGLG EDAMEAVRRA FPGQDFAIDV VNRAFGRRNP AERSQQDSSA  60
CGISGACTSE KPMDLEQVEN AGKSCAQQDP SASEMQLRSQ EVEQAGQRCD APPAPADVGT  120
EAGGPPAPAD VGAEAGGGWN RRVRRGRIPD EREPDAQRVS ALEKALTGFA ERQTDVVVNP  180
TVGTCFDSIT EAYDFYNLYS WEMGFGIRYG KSRRNTKGGK CMQEITCVNA GKPNMGGKSR  240
RCECTALIRL LRTDDNGWYV TQHRKVHNHA FSTTYGNKVH WPSHKHLDKY TRDLVRQLRH  300
NNVNLGVYDT IASFFGRMEN VPFNKRSIRT LCGEVIREQA VDDARKTMET AAASGERPEN  360
HTGEETTFNC MGLASTTVGS PNMPVEPLRY PEQDDTHSNA EAGRLADLLL AFGDCHLVLK  420
SCTYDDLINS NGTMSGLEEA VKAVTPHLQQ GIFGDLWSRA HNSGGVVSAQ VLTIKDLFRF  480
TRWLTTTTGQ HNLRCVQQRA KLVNSGKAVL EPEQIALLHL YQAENDEYSV KMNKLQGERD  540
AKIAHYMAKI DEARKSFEVS IQAAKQHYPV SASYVALDSN ELRAQCWTMY LAQCRKEAKD  600
LNAKASNIVE KYGPEVIQRH LFEFCSQETN RQALLKYAQT KVNNLKEAGD ARGEDTLHDY  660
MTLLDIEKAY ALLAAEEQIA NCPDTCGGSE DADRGNINNI IARGEAADGA RGDGQDGGEG  720
ASEGPPRQKR QRNDQDYVWW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G06250.1	3e-10	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG023050.2