PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG023050.7

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 602aa MW: 67570.6 Da PI: 6.8822

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG023050.7	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	44.5	5e-14	56	134	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fYn Y+ e+GF +r ks+++++ g +++ +C + gk++ k+ r++C+a +++ +++d+ w+vt+ ++ HnH+++ TRIDC5AG023050.7 56 DFYNLYSWEMGFGIRYGKSRRNTKGG-KCMQEITCVNAGKPNMGGKS----------RRCECTALIRLLRTDDNGWYVTQHRKVHNHAFS 134 6*******************8777.66789******98877..........9***************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 602 aa Download sequence
EPQRVRRGRI PDEREPDAQR VSALEKALTG FAERQTDVVV NPTVGTCFDS ITEAYDFYNL 60 YSWEMGFGIR YGKSRRNTKG GKCMQEITCV NAGKPNMGGK SRRCECTALI RLLRTDDNGW 120 YVTQHRKVHN HAFSTTYGNK VHWPSHKHLD KYTRDLVRQL RHNNVNLGVY DTIASFFGRM 180 ENVPFNKRSI RTLCGEVIRE QAVDDARKTM ETAAASGERP ENHTGEETTF NCMGLASTTV 240 GSPNMPVEPL RYPEQDDTHS NAEAGRLADL LLAFGDCHLV LKSCTYDDLI NSNGTMSGLE 300 EAVKAVTPHL QQGIFGDLWS RAHNSGGVVS AQVLTIKDLF RFTRWLTTTT GQHNLRCVQQ 360 RAKLVNSGKA VLEPEQIALL HLYQAENDEY SVKMNKLQGE RDAKIAHYMA KIDEARKSFE 420 VSIQAAKQHY PVSASYVALD SNELRAQCWT MYLAQCRKEA KDLNAKASNI VEKYGPEVIQ 480 RHLFEFCSQE TNRQALLKYA QTKVNNLKEA GDARGEDTLH DYMTLLDIEK AYALLAAEEQ 540 IANCPDTCGG SEDADRGNIN NIIARGEAAD GARGDGQDGG EGASEGPPRQ KRQRNDQDYV 600 WW

Sequence ? help Back to Top

Protein Sequence Length: 602 aa Download sequence

EPQRVRRGRI PDEREPDAQR VSALEKALTG FAERQTDVVV NPTVGTCFDS ITEAYDFYNL  60
YSWEMGFGIR YGKSRRNTKG GKCMQEITCV NAGKPNMGGK SRRCECTALI RLLRTDDNGW  120
YVTQHRKVHN HAFSTTYGNK VHWPSHKHLD KYTRDLVRQL RHNNVNLGVY DTIASFFGRM  180
ENVPFNKRSI RTLCGEVIRE QAVDDARKTM ETAAASGERP ENHTGEETTF NCMGLASTTV  240
GSPNMPVEPL RYPEQDDTHS NAEAGRLADL LLAFGDCHLV LKSCTYDDLI NSNGTMSGLE  300
EAVKAVTPHL QQGIFGDLWS RAHNSGGVVS AQVLTIKDLF RFTRWLTTTT GQHNLRCVQQ  360
RAKLVNSGKA VLEPEQIALL HLYQAENDEY SVKMNKLQGE RDAKIAHYMA KIDEARKSFE  420
VSIQAAKQHY PVSASYVALD SNELRAQCWT MYLAQCRKEA KDLNAKASNI VEKYGPEVIQ  480
RHLFEFCSQE TNRQALLKYA QTKVNNLKEA GDARGEDTLH DYMTLLDIEK AYALLAAEEQ  540
IANCPDTCGG SEDADRGNIN NIIARGEAAD GARGDGQDGG EGASEGPPRQ KRQRNDQDYV  600
WW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G06250.1	2e-10	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG023050.7