PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG023050.8

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 559aa MW: 62732.2 Da PI: 6.881

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG023050.8	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	44.7	4.5e-14	13	91	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fYn Y+ e+GF +r ks+++++ g +++ +C + gk++ k+ r++C+a +++ +++d+ w+vt+ ++ HnH+++ TRIDC5AG023050.8 13 DFYNLYSWEMGFGIRYGKSRRNTKGG-KCMQEITCVNAGKPNMGGKS----------RRCECTALIRLLRTDDNGWYVTQHRKVHNHAFS 91 6*******************8777.66789******98877..........9***************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 559 aa Download sequence
MGTCFDSITE AYDFYNLYSW EMGFGIRYGK SRRNTKGGKC MQEITCVNAG KPNMGGKSRR 60 CECTALIRLL RTDDNGWYVT QHRKVHNHAF STTYGNKVHW PSHKHLDKYT RDLVRQLRHN 120 NVNLGVYDTI ASFFGRMENV PFNKRSIRTL CGEVIREQAV DDARKTMETA AASGERPENH 180 TGEETTFNCM GLASTTVGSP NMPVEPLRYP EQDDTHSNAE AGRLADLLLA FGDCHLVLKS 240 CTYDDLINSN GTMSGLEEAV KAVTPHLQQG IFGDLWSRAH NSGGVVSAQV LTIKDLFRFT 300 RWLTTTTGQH NLRCVQQRAK LVNSGKAVLE PEQIALLHLY QAENDEYSVK MNKLQGERDA 360 KIAHYMAKID EARKSFEVSI QAAKQHYPVS ASYVALDSNE LRAQCWTMYL AQCRKEAKDL 420 NAKASNIVEK YGPEVIQRHL FEFCSQETNR QALLKYAQTK VNNLKEAGDA RGEDTLHDYM 480 TLLDIEKAYA LLAAEEQIAN CPDTCGGSED ADRGNINNII ARGEAADGAR GDGQDGGEGA 540 SEGPPRQKRQ RNDQDYVWW

Sequence ? help Back to Top

Protein Sequence Length: 559 aa Download sequence

MGTCFDSITE AYDFYNLYSW EMGFGIRYGK SRRNTKGGKC MQEITCVNAG KPNMGGKSRR  60
CECTALIRLL RTDDNGWYVT QHRKVHNHAF STTYGNKVHW PSHKHLDKYT RDLVRQLRHN  120
NVNLGVYDTI ASFFGRMENV PFNKRSIRTL CGEVIREQAV DDARKTMETA AASGERPENH  180
TGEETTFNCM GLASTTVGSP NMPVEPLRYP EQDDTHSNAE AGRLADLLLA FGDCHLVLKS  240
CTYDDLINSN GTMSGLEEAV KAVTPHLQQG IFGDLWSRAH NSGGVVSAQV LTIKDLFRFT  300
RWLTTTTGQH NLRCVQQRAK LVNSGKAVLE PEQIALLHLY QAENDEYSVK MNKLQGERDA  360
KIAHYMAKID EARKSFEVSI QAAKQHYPVS ASYVALDSNE LRAQCWTMYL AQCRKEAKDL  420
NAKASNIVEK YGPEVIQRHL FEFCSQETNR QALLKYAQTK VNNLKEAGDA RGEDTLHDYM  480
TLLDIEKAYA LLAAEEQIAN CPDTCGGSED ADRGNINNII ARGEAADGAR GDGQDGGEGA  540
SEGPPRQKRQ RNDQDYVWW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G18960.1	2e-08	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG023050.8