PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG023540.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 744aa    MW: 83816.6 Da    PI: 7.0843
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG023540.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS383.62.4e-1173697401374
              GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkf 93 
                       l++ L++cA+av+++d + a++lL+++++++  +gd  qRla++f+++L+arla+++s+ y+ l +++t+    s+ l+a++l++ ++P+ ++
  TRIDC5AG023540.1 369 LRTILIHCAQAVAADDRRTANELLKQIKQHSKVNGDGSQRLAFCFAQGLEARLAGTGSQQYHRLVAKRTT---ASDMLKAYHLYFAACPFKRL 458
                       5789************************************************************999999...9******************* PP

              GRAS  94 shltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvak 184
                       sh++ Nq+Il  ++++++vHiiDf+i  GlQWp+L++ L++R++gpp lRiTg++ pe+g   +e++eetg+rLa++A++++vpfe++  +a+
  TRIDC5AG023540.1 459 SHFLSNQTILSMTKNAKKVHIIDFGIYFGLQWPCLIRRLSKREGGPPILRITGIDVPEPGfrPTERIEETGQRLAEYAKKFEVPFEYHG-IAS 550
                       ***********************************************************9*****************************.7** PP

              GRAS 185 rledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpr 277
                       ++e+++ e+L+v ++E+++Vn+ ++  +l de+v+++s+r++vL+++++++P ++++   + +++ + F +rf eal ++salfd+lea++pr
  TRIDC5AG023540.1 551 KWETIRAEDLKVGKDEVVIVNCLYRFRNLIDETVAVDSPRNRVLNTIRQVNPAIFIHGIVNGSYSVPFFITRFREALFHFSALFDMLEATVPR 643
                       ********************************************************************************************* PP

              GRAS 278 eseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsv 370
                       ++++r+ +Er l+gre+ nv+aceg++r+er et+++W+ r  +aGF + pl+++++ +ak  ++ ++ + + ++e+sg+l++gWk+r ++++
  TRIDC5AG023540.1 644 DDDQRRLIERDLFGREALNVIACEGSDRVERPETYKQWQVRNLRAGFVQSPLNQDIVIKAKDKVKDIYHKDFVIDEDSGWLLQGWKGRIIYAI 736
                       ********************************************************************888********************** PP

              GRAS 371 SaWr 374
                       + W+
  TRIDC5AG023540.1 737 TTWK 740
                       ***8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 744 aa     Download sequence    
SLRHRPPRQG SMPSGSVEHQ TISGSLIHSM IQFCGAPEYF MFNDPQPVIP HHAAAEPSPN  60
APVATLSRAT NTETDNPEDW EFISDESLNY ISRMLMEEDI DEKVSVYQEE SATLRATAKP  120
FYDILGHKFP PSPDRTLTTW SLDSPSESSS SGHAQSLSSV GTSGSIGGAV HSNQCHNVGH  180
SEQLEAYRGF CGRSSQPLVA SSSGVSDAAE SLEDPLITNG RIPEYLFESL PTWDFRRGVE  240
EAQKFLPGGD KLVIDLEAAG VSKPQEAVKD IPFNVSRTEV LKAKKNRQSE DLDLIEGRNI  300
KQSAFCSDEP DDWVEMFDDL FRQTEKKATV LREKMRSEAS KNSQVIQTKG TTGVKTRGRK  360
PTKNDVVDLR TILIHCAQAV AADDRRTANE LLKQIKQHSK VNGDGSQRLA FCFAQGLEAR  420
LAGTGSQQYH RLVAKRTTAS DMLKAYHLYF AACPFKRLSH FLSNQTILSM TKNAKKVHII  480
DFGIYFGLQW PCLIRRLSKR EGGPPILRIT GIDVPEPGFR PTERIEETGQ RLAEYAKKFE  540
VPFEYHGIAS KWETIRAEDL KVGKDEVVIV NCLYRFRNLI DETVAVDSPR NRVLNTIRQV  600
NPAIFIHGIV NGSYSVPFFI TRFREALFHF SALFDMLEAT VPRDDDQRRL IERDLFGREA  660
LNVIACEGSD RVERPETYKQ WQVRNLRAGF VQSPLNQDIV IKAKDKVKDI YHKDFVIDED  720
SGWLLQGWKG RIIYAITTWK HNNS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37650.10.0GRAS family protein