PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG023540.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 739aa    MW: 83166.9 Da    PI: 6.8565
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG023540.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS383.62.4e-1173647351374
              GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkf 93 
                       l++ L++cA+av+++d + a++lL+++++++  +gd  qRla++f+++L+arla+++s+ y+ l +++t+    s+ l+a++l++ ++P+ ++
  TRIDC5AG023540.2 364 LRTILIHCAQAVAADDRRTANELLKQIKQHSKVNGDGSQRLAFCFAQGLEARLAGTGSQQYHRLVAKRTT---ASDMLKAYHLYFAACPFKRL 453
                       5789************************************************************999999...9******************* PP

              GRAS  94 shltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvak 184
                       sh++ Nq+Il  ++++++vHiiDf+i  GlQWp+L++ L++R++gpp lRiTg++ pe+g   +e++eetg+rLa++A++++vpfe++  +a+
  TRIDC5AG023540.2 454 SHFLSNQTILSMTKNAKKVHIIDFGIYFGLQWPCLIRRLSKREGGPPILRITGIDVPEPGfrPTERIEETGQRLAEYAKKFEVPFEYHG-IAS 545
                       ***********************************************************9*****************************.7** PP

              GRAS 185 rledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpr 277
                       ++e+++ e+L+v ++E+++Vn+ ++  +l de+v+++s+r++vL+++++++P ++++   + +++ + F +rf eal ++salfd+lea++pr
  TRIDC5AG023540.2 546 KWETIRAEDLKVGKDEVVIVNCLYRFRNLIDETVAVDSPRNRVLNTIRQVNPAIFIHGIVNGSYSVPFFITRFREALFHFSALFDMLEATVPR 638
                       ********************************************************************************************* PP

              GRAS 278 eseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsv 370
                       ++++r+ +Er l+gre+ nv+aceg++r+er et+++W+ r  +aGF + pl+++++ +ak  ++ ++ + + ++e+sg+l++gWk+r ++++
  TRIDC5AG023540.2 639 DDDQRRLIERDLFGREALNVIACEGSDRVERPETYKQWQVRNLRAGFVQSPLNQDIVIKAKDKVKDIYHKDFVIDEDSGWLLQGWKGRIIYAI 731
                       ********************************************************************888********************** PP

              GRAS 371 SaWr 374
                       + W+
  TRIDC5AG023540.2 732 TTWK 735
                       ***8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 739 aa     Download sequence    
PPRQGSMPSG SVEHQTISGS LIHSMIQFCG APEYFMFNDP QPVIPHHAAA EPSPNAPVAT  60
LSRATNTETD NPEDWEFISD ESLNYISRML MEEDIDEKVS VYQEESATLR ATAKPFYDIL  120
GHKFPPSPDR TLTTWSLDSP SESSSSGHAQ SLSSVGTSGS IGGAVHSNQC HNVGHSEQLE  180
AYRGFCGRSS QPLVASSSGV SDAAESLEDP LITNGRIPEY LFESLPTWDF RRGVEEAQKF  240
LPGGDKLVID LEAAGVSKPQ EAVKDIPFNV SRTEVLKAKK NRQSEDLDLI EGRNIKQSAF  300
CSDEPDDWVE MFDDLFRQTE KKATVLREKM RSEASKNSQV IQTKGTTGVK TRGRKPTKND  360
VVDLRTILIH CAQAVAADDR RTANELLKQI KQHSKVNGDG SQRLAFCFAQ GLEARLAGTG  420
SQQYHRLVAK RTTASDMLKA YHLYFAACPF KRLSHFLSNQ TILSMTKNAK KVHIIDFGIY  480
FGLQWPCLIR RLSKREGGPP ILRITGIDVP EPGFRPTERI EETGQRLAEY AKKFEVPFEY  540
HGIASKWETI RAEDLKVGKD EVVIVNCLYR FRNLIDETVA VDSPRNRVLN TIRQVNPAIF  600
IHGIVNGSYS VPFFITRFRE ALFHFSALFD MLEATVPRDD DQRRLIERDL FGREALNVIA  660
CEGSDRVERP ETYKQWQVRN LRAGFVQSPL NQDIVIKAKD KVKDIYHKDF VIDEDSGWLL  720
QGWKGRIIYA ITTWKHNNS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37650.10.0GRAS family protein