PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG024070.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 216aa    MW: 24025.4 Da    PI: 10.2216
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG024070.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM1652.7e-51691971129
               NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 
                       lppGfrFhPtdee+++ yL +k  + ++   +++ evd++++eP+dLp k++ +ekewyfF+++d ky+tg+r+nratk+gyWkatgkd+e++
  TRIDC5AG024070.1  69 LPPGFRFHPTDEEIITSYLLRKFLDPSFVS-RAVGEVDLNSCEPRDLPGKANMGEKEWYFFVHKDLKYPTGSRANRATKEGYWKATGKDREIF 160
                       79*************************888.88***************99999**************************************** PP

               NAM  94 sk.kgelvglkktLvfykgrapkgektdWvmheyrle 129
                       +   +elvg+kktLvfy+grap+g k++Wvmhe+rle
  TRIDC5AG024070.1 161 KPrARELVGMKKTLVFYRGRAPRGAKSEWVMHEFRLE 197
                       9867788***************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 216 aa     Download sequence    
IHPSAPSLAF LCAQASLRGS SSSSSSRSIS LVASRLLLSL AGLIERASMV ESVAATPSEE  60
QGRGGGLSLP PGFRFHPTDE EIITSYLLRK FLDPSFVSRA VGEVDLNSCE PRDLPGKANM  120
GEKEWYFFVH KDLKYPTGSR ANRATKEGYW KATGKDREIF KPRARELVGM KKTLVFYRGR  180
APRGAKSEWV MHEFRLEGKS RGQTMNNPKD EWVVCK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G53950.13e-72NAC family protein