PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG024080.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NAC

Protein Properties

Length: 359aa MW: 39968.6 Da PI: 6.7914

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG024080.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	167	6.5e-52	13	140	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lppGfrFhPtdeel+v+yL +++++ + ++ +i+ev+iyk++PwdLp k+ +e+ewyfFs+rd+ky++g r+nra+ sgyWkatg+dk++l TRIDC5AG024080.2 13 LPPGFRFHPTDEELIVHYLGRQAASMPSPV-PIIAEVNIYKCNPWDLPGKALFGENEWYFFSPRDRKYPNGARPNRAAGSGYWKATGTDKAIL 104 79***********************999.88***********8777899********************************** PP NAM 94 sk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 s+ +e +g+kk Lvfy+g+ pkg+ktdW+mheyrl TRIDC5AG024080.2 105 STpANESIGVKKALVFYRGKPPKGVKTDWIMHEYRL 140 9988899*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 359 aa Download sequence
MPMGSSSAAM PALPPGFRFH PTDEELIVHY LGRQAASMPS PVPIIAEVNI YKCNPWDLPG 60 KALFGENEWY FFSPRDRKYP NGARPNRAAG SGYWKATGTD KAILSTPANE SIGVKKALVF 120 YRGKPPKGVK TDWIMHEYRL TAADNRTTKR RGSSMRLDDW VLCRIHKKCN NLHNFSSSDQ 180 EQEHEQESST TVEGSHNNHT VSSPKSEAFD GDGDDQLQLQ QFRPMAIAKS CSLTDLLNTV 240 DYAALSHLLL DGAGAGASSS DAGADYQLPP ENPLIYSQPP WQQTLHYNNN NNGYVNIDTI 300 DVPQIPEARV DDYGMNGDRY NGMKRKRSSG SLYCSQLQLP ADQYSGMLIH PFLSQQLHM

Sequence ? help Back to Top

Protein Sequence Length: 359 aa Download sequence

MPMGSSSAAM PALPPGFRFH PTDEELIVHY LGRQAASMPS PVPIIAEVNI YKCNPWDLPG  60
KALFGENEWY FFSPRDRKYP NGARPNRAAG SGYWKATGTD KAILSTPANE SIGVKKALVF  120
YRGKPPKGVK TDWIMHEYRL TAADNRTTKR RGSSMRLDDW VLCRIHKKCN NLHNFSSSDQ  180
EQEHEQESST TVEGSHNNHT VSSPKSEAFD GDGDDQLQLQ QFRPMAIAKS CSLTDLLNTV  240
DYAALSHLLL DGAGAGASSS DAGADYQLPP ENPLIYSQPP WQQTLHYNNN NNGYVNIDTI  300
DVPQIPEARV DDYGMNGDRY NGMKRKRSSG SLYCSQLQLP ADQYSGMLIH PFLSQQLHM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69490.1	9e-81	NAC family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG024080.2