PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG024080.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NAC

Protein Properties

Length: 356aa MW: 39542.2 Da PI: 6.7368

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG024080.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	167	6.4e-52	15	142	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lppGfrFhPtdeel+v+yL +++++ + ++ +i+ev+iyk++PwdLp k+ +e+ewyfFs+rd+ky++g r+nra+ sgyWkatg+dk++l TRIDC5AG024080.3 15 LPPGFRFHPTDEELIVHYLGRQAASMPSPV-PIIAEVNIYKCNPWDLPGKALFGENEWYFFSPRDRKYPNGARPNRAAGSGYWKATGTDKAIL 106 79***********************999.88***********8777899********************************** PP NAM 94 sk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 s+ +e +g+kk Lvfy+g+ pkg+ktdW+mheyrl TRIDC5AG024080.3 107 STpANESIGVKKALVFYRGKPPKGVKTDWIMHEYRL 142 9988899*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 356 aa Download sequence
VAMPMGSSSA AMPALPPGFR FHPTDEELIV HYLGRQAASM PSPVPIIAEV NIYKCNPWDL 60 PGKALFGENE WYFFSPRDRK YPNGARPNRA AGSGYWKATG TDKAILSTPA NESIGVKKAL 120 VFYRGKPPKG VKTDWIMHEY RLTAADNRTT KRRGSSMRQL DDWVLCRIHK KCNNLHNFSS 180 SDQEQEHEQE SSTTVEGSHN NHTVSSPKSE AFDGDGDDQL QLQQFRPMAI AKSCSLTDLL 240 NTVDYAALSH LLLDGAGAGA SSSDAGADYQ LPPENPLIYS QPPWQQTLHY NNNNNGYVNI 300 DTIDVPQIPE ARVDDYGMNG DRYNGMKRKR SSGSLYCSQL QLPADQYSGM LIHPFL

Sequence ? help Back to Top

Protein Sequence Length: 356 aa Download sequence

VAMPMGSSSA AMPALPPGFR FHPTDEELIV HYLGRQAASM PSPVPIIAEV NIYKCNPWDL  60
PGKALFGENE WYFFSPRDRK YPNGARPNRA AGSGYWKATG TDKAILSTPA NESIGVKKAL  120
VFYRGKPPKG VKTDWIMHEY RLTAADNRTT KRRGSSMRQL DDWVLCRIHK KCNNLHNFSS  180
SDQEQEHEQE SSTTVEGSHN NHTVSSPKSE AFDGDGDDQL QLQQFRPMAI AKSCSLTDLL  240
NTVDYAALSH LLLDGAGAGA SSSDAGADYQ LPPENPLIYS QPPWQQTLHY NNNNNGYVNI  300
DTIDVPQIPE ARVDDYGMNG DRYNGMKRKR SSGSLYCSQL QLPADQYSGM LIHPFL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04070.2	5e-79	NAC family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG024080.3