PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG024120.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family C3H
Protein Properties Length: 248aa    MW: 26962.4 Da    PI: 7.1903
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG024120.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH29.61.2e-09139159526
                       --SGGGGTS--TTTTT-SS-SS CS
           zf-CCCH   5 lCrffartGtCkyGdrCkFaHg 26 
                       +C+++ar G+Ck G++C+F Hg
  TRIDC5AG024120.2 139 PCMYYAR-GFCKNGSSCRFVHG 159
                       8******.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 248 aa     Download sequence    
MDAYEATKVV FARVQALHPD LASKIMGMLL IQDKSEEDMI RLAFGPEHLL HAVVARARAD  60
LAAAAHHSKP SSPPTASWGT GLPAEDAPFP GVDQARYEGG GEGFYPPEEF GCWSPASGGQ  120
HRRSFSLSDA EAAAGGWKPC MYYARGFCKN GSSCRFVHGL PDHVTEQDME VWTAAMRSEL  180
MSPAFPFSPS PRGLNFLLQQ QQQQQGRWRR PCFLAVEAAT TCTSSPCGRL GWTAVATWPP  240
APPRGRST