PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG024190.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 651aa    MW: 69662.1 Da    PI: 6.4021
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG024190.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS407.31.4e-1242816422374
              GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetsekn..sseelaalklfsevsPilk 92 
                        +lLl+cAe v++++l +aq++L ++ ela+p g+++qR+aayf+eA +arl++s+ +ly+ lp  + + ++    +++aa+++f+ +sP++k
  TRIDC5AG024190.3 281 LTLLLQCAESVNADNLDEAQTALLEIAELATPFGTSTQRVAAYFAEAVSARLVSSCLGLYAPLPHASPAASRlvNGRVAAAFQVFNGISPLVK 373
                       579************************************************************7776666665677788999*********** PP

              GRAS  93 fshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakr 185
                       fsh+taNqaI ea+e+eervHiiD+di+qGlQWp L++ LasRp+gpp++R+Tg+g+    s ++le+tg+rL++fA++lg+pfef + va++
  TRIDC5AG024190.3 374 FSHFTANQAIQEAFEREERVHIIDLDIMQGLQWPGLFHILASRPGGPPRVRLTGLGA----SMDALEATGKRLSDFADTLGLPFEFCP-VADK 461
                       *********************************************************....***************************.7*** PP

              GRAS 186 ledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpre 278
                         +l++e+L v ++Ea+aV++ +  h+l+d ++s ++    +L l+k+l Pkvv++veq++ h ++sFl+rf+ea++yysalfdsl+a+++++
  TRIDC5AG024190.3 462 AGNLDPEKLGVTRREAVAVHWLH--HSLYDVTGSDSN----TLCLIKRLAPKVVTMVEQDLRH-TGSFLARFVEAIHYYSALFDSLDASYGED 547
                       **********************9..999999999999....**********************.889************************** PP

              GRAS 279 seerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvS 371
                       s er++vE++ll+rei+nv+a  g +r+ + + ++ Wr+ l ++GF++++l  +aa+qa lll +++sdgy++ ee+g+l lgWkd +L+++S
  TRIDC5AG024190.3 548 SPERHVVEQQLLSREIRNVLAVGGPSRTGDVK-FGCWRDSLARSGFGAASLAGSAAAQAALLLGMFPSDGYTLVEENGALKLGWKDLTLLTAS 639
                       **************************999887.************************************************************ PP

              GRAS 372 aWr 374
                       aWr
  TRIDC5AG024190.3 640 AWR 642
                       **8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 651 aa     Download sequence    
MGSSSLLLFP SSSSSAPRSS YSHATASSHC HLLPCPPDFL LHLHLLDHRE QEPAAAAMVR  60
KRPATDMDLP PPRRHVTGDL SDMTAGPPVL SSATAQLPAL PSQLLPPFQL QQQQQQQPVD  120
HMDVAAAPAQ AGEAANTTAF VDGIIRDIIG SSGAGVSVAQ LIHNVREIIH PCNPGLASLL  180
ELRLRSLLAS DPAPPQQHQH QPALLPNAPM PMVALPPPPP DKRRREEERE PNNPPQSPKP  240
PSAEEAAAAA AAAAAAASAA VKERKEGQRR KQRDEEGLHL LTLLLQCAES VNADNLDEAQ  300
TALLEIAELA TPFGTSTQRV AAYFAEAVSA RLVSSCLGLY APLPHASPAA SRLVNGRVAA  360
AFQVFNGISP LVKFSHFTAN QAIQEAFERE ERVHIIDLDI MQGLQWPGLF HILASRPGGP  420
PRVRLTGLGA SMDALEATGK RLSDFADTLG LPFEFCPVAD KAGNLDPEKL GVTRREAVAV  480
HWLHHSLYDV TGSDSNTLCL IKRLAPKVVT MVEQDLRHTG SFLARFVEAI HYYSALFDSL  540
DASYGEDSPE RHVVEQQLLS REIRNVLAVG GPSRTGDVKF GCWRDSLARS GFGAASLAGS  600
AAAQAALLLG MFPSDGYTLV EENGALKLGW KDLTLLTASA WRPIVGASWS A
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54220.10.0GRAS family protein