PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG024190.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 593aa    MW: 63700.4 Da    PI: 6.422
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG024190.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS407.71.1e-1242245852374
              GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetsekn..sseelaalklfsevsPilk 92 
                        +lLl+cAe v++++l +aq++L ++ ela+p g+++qR+aayf+eA +arl++s+ +ly+ lp  + + ++    +++aa+++f+ +sP++k
  TRIDC5AG024190.4 224 LTLLLQCAESVNADNLDEAQTALLEIAELATPFGTSTQRVAAYFAEAVSARLVSSCLGLYAPLPHASPAASRlvNGRVAAAFQVFNGISPLVK 316
                       579************************************************************7776666665677788999*********** PP

              GRAS  93 fshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakr 185
                       fsh+taNqaI ea+e+eervHiiD+di+qGlQWp L++ LasRp+gpp++R+Tg+g+    s ++le+tg+rL++fA++lg+pfef + va++
  TRIDC5AG024190.4 317 FSHFTANQAIQEAFEREERVHIIDLDIMQGLQWPGLFHILASRPGGPPRVRLTGLGA----SMDALEATGKRLSDFADTLGLPFEFCP-VADK 404
                       *********************************************************....***************************.7*** PP

              GRAS 186 ledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpre 278
                         +l++e+L v ++Ea+aV++ +  h+l+d ++s ++    +L l+k+l Pkvv++veq++ h ++sFl+rf+ea++yysalfdsl+a+++++
  TRIDC5AG024190.4 405 AGNLDPEKLGVTRREAVAVHWLH--HSLYDVTGSDSN----TLCLIKRLAPKVVTMVEQDLRH-TGSFLARFVEAIHYYSALFDSLDASYGED 490
                       **********************9..999999999999....**********************.889************************** PP

              GRAS 279 seerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvS 371
                       s er++vE++ll+rei+nv+a  g +r+ + + ++ Wr+ l ++GF++++l  +aa+qa lll +++sdgy++ ee+g+l lgWkd +L+++S
  TRIDC5AG024190.4 491 SPERHVVEQQLLSREIRNVLAVGGPSRTGDVK-FGCWRDSLARSGFGAASLAGSAAAQAALLLGMFPSDGYTLVEENGALKLGWKDLTLLTAS 582
                       **************************999887.************************************************************ PP

              GRAS 372 aWr 374
                       aWr
  TRIDC5AG024190.4 583 AWR 585
                       **8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 593 aa     Download sequence    
MVRKRPATDM DLPPPRRHVT GDLSDMTAGP PVLSSATAQL PALPSQLLPP FQLQQQQQQQ  60
PVDHMDVAAA PAQAGEAANT TAFVDGIIRD IIGSSGAGVS VAQLIHNVRE IIHPCNPGLA  120
SLLELRLRSL LASDPAPPQQ HQHQPALLPN APMPMVALPP PPPDKRRREE EREPNNPPQS  180
PKPPSAEEAA AAAAAAAAAA SAAVKERKEG QRRKQRDEEG LHLLTLLLQC AESVNADNLD  240
EAQTALLEIA ELATPFGTST QRVAAYFAEA VSARLVSSCL GLYAPLPHAS PAASRLVNGR  300
VAAAFQVFNG ISPLVKFSHF TANQAIQEAF EREERVHIID LDIMQGLQWP GLFHILASRP  360
GGPPRVRLTG LGASMDALEA TGKRLSDFAD TLGLPFEFCP VADKAGNLDP EKLGVTRREA  420
VAVHWLHHSL YDVTGSDSNT LCLIKRLAPK VVTMVEQDLR HTGSFLARFV EAIHYYSALF  480
DSLDASYGED SPERHVVEQQ LLSREIRNVL AVGGPSRTGD VKFGCWRDSL ARSGFGAASL  540
AGSAAAQAAL LLGMFPSDGY TLVEENGALK LGWKDLTLLT ASAWRPMHSR SFL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54220.10.0GRAS family protein