PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG024570.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

WRKY

Protein Properties

Length: 249aa MW: 26865.3 Da PI: 4.9839

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG024570.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	67.7	1.7e-21	45	109	3	59
-SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTT.....EEEEEEES--SS- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpk.....vveitYegeHnhe 59 Dgy+WrKYGqK+++ +++pr+YYrCt + gCp+k+ v+r+++d++ +++Y +eH ++ TRIDC5AG024570.1 45 DGYQWRKYGQKQIEAAKHPRNYYRCTNStnqGCPAKRTVQRNDDDGSdderpKYTVVYISEHSCK 109 9**********************9888889********99886333336789999999886 PP

Sequence ? help Back to Top
Protein Sequence Length: 249 aa Download sequence
EDERHEEGQG HRGGAATATK ATTRCRRKKQ GATTTTLVTT VPDFDGYQWR KYGQKQIEAA 60 KHPRNYYRCT NSTNQGCPAK RTVQRNDDDG SDDERPKYTV VYISEHSCKA TESAAVPVIL 120 ETTVRTDTAA APDVAVVPGS SSGAISSETQ SPASSSDITW SSGGSDGGAN VPPRERDDYS 180 RLFAIEDDCW GWNASPQAPA AAAALLQEMD FDGPIRSPVH VAAADGSWIN DLFVNEPPFV 240 LNSCHLFGL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G66550.2	1e-14	WRKY family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG024570.1