PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG024620.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

WRKY

Protein Properties

Length: 252aa MW: 27818.8 Da PI: 5.5678

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG024620.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	63.3	4.1e-20	96	162	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SS......STTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversae......dpkvveitYegeHnhe 59 Dg++WrKYGqK ++ +++prsYY+Ct++ +C+++k v+++++ dp + ++Y g+H+++ TRIDC5AG024620.1 96 YDGHQWRKYGQKIINHTKHPRSYYKCTYKqeqDCRATKTVQQQQQdagvddDPAMYAVVYYGQHTCK 162 59************************98999****9875222222789*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 252 aa Download sequence
LAGGERAEVV AQMFESILDC SAKAIATLKL LRLDHSQVDD AVLPTAMVDD KTRVRKIVTG 60 DGEKDSDDNA KPLRRQRKRR RLADDSVALE TPVPHYDGHQ WRKYGQKIIN HTKHPRSYYK 120 CTYKQEQDCR ATKTVQQQQQ DAGVDDDPAM YAVVYYGQHT CKPGQTDAAV VETASTGRCG 180 EGGGEEHARS NSQCSNISVT CSSIVVDHHQ TTTAASLESS CNLLDMAGDL ATPEVNQYDQ 240 LFDVDSFSPL DL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	77	81	RKRRR
2	78	82	KRRRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46400.1	7e-18	WRKY family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG024620.1