PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG025380.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

LBD

Protein Properties

Length: 159aa MW: 17813.3 Da PI: 6.0848

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG025380.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	119.7	1.7e-37	1	90	11	100
DUF260 11 kCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallkee 100 +Ca+dCv+apyfp e+p++fa vh++FGasnv+k+l++lp +r da+sslvyeA ar+rdPvyG++g i+ lqqq++ql+++la++++e TRIDC5AG025380.1 1 RCARDCVFAPYFPPEDPHRFATVHRVFGASNVSKMLQELPAAQRADAVSSLVYEATARMRDPVYGCAGAISYLQQQVSQLQVQLAVAQAE 90 6*************************************************************************************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 159 aa Download sequence
RCARDCVFAP YFPPEDPHRF ATVHRVFGAS NVSKMLQELP AAQRADAVSS LVYEATARMR 60 DPVYGCAGAI SYLQQQVSQL QVQLAVAQAE ILQRINHPSP ASAFHLQELQ QRQVQQQQQM 120 QMDDDDKAYS SLVMQNDLMS TLLLQEACLK KDVSASVIF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G30130.1	1e-43	LBD family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG025380.1