PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG032190.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 290aa    MW: 31573.8 Da    PI: 4.8669
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG032190.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH253.3e-08164208655
                       HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                       +++ r RR+ri ++ +eL +l+P         Kl+ ae+L++A +++k Lq
  TRIDC5AG032190.1 164 SAAARERRRRISEKTAELSRLIPGgH------KLNTAEMLQEAARHVKLLQ 208
                       5677999999*************955......****************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 290 aa     Download sequence    
MSMAPLSFRP TATARPLFRC FDDGADRDVS FLQDVHPDVG DALLGFVYDP LDPAVNAGLD  60
EFLNIPPYGD GDDDDEDGRQ RCAKKPRAAG LEEDSWFDFT AADGSIGQKW DNACTQQVPE  120
FLPEFVLPLP PPPPPPPPPQ VYPPFVRGAD AKKLQAAGNG SSQSAAARER RRRISEKTAE  180
LSRLIPGGHK LNTAEMLQEA ARHVKLLQAQ VGMLTLLNSI EDEKVPAMAQ EHMHALLVCG  240
GMQERLAAEG KCLVPRALVD TIAKDAAVRS NALVNRDLTR FTESLAAEKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34820.12e-20bHLH family protein