PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG033370.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

TCP

Protein Properties

Length: 262aa MW: 28708.1 Da PI: 6.8645

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG033370.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	111.4	1.2e-34	102	201	3	89
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg...... 88 ++drhski T++g RdRR+Rls+++a+ fF+Lqd+LGfdk+skt++WLl+q+kpai+ l ++s +a ++ e+++ss s+ +++g TRIDC5AG033370.1 102 FRTDRHSKIRTAQGVRDRRMRLSLDVARDFFALQDQLGFDKASKTVDWLLTQSKPAIDRLSESSRLNAARAgEDGMSSLSSV-EREGrrlket 193 689************************************************************7766655554444443333.2222123222 PP TCP 89 .......k 89 k TRIDC5AG033370.1 194 elaagsgK 201 22222221 PP

Sequence ? help Back to Top
Protein Sequence Length: 262 aa Download sequence
MLPYHPNPHG FWISREPPAQ VPNPASGFAM APPAHLDHQI QHYDHFFPGH GNQFNSETLE 60 AVLMRPRPPA PPLVEMPPAN EARTGAVQAA GTGHARARKR PFRTDRHSKI RTAQGVRDRR 120 MRLSLDVARD FFALQDQLGF DKASKTVDWL LTQSKPAIDR LSESSRLNAA RAGEDGMSSL 180 SSVEREGRRL KETELAAGSG KGAADAEKAM KARGGGTSVL MEHRRENGGL MSASMTGGEY 240 YDLGEMMCIN AGECDDDGDY DE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18550.2	2e-27	TCP family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG033370.1