PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG034820.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 365aa    MW: 39462.1 Da    PI: 5.0647
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG034820.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.64.1e-20102151255
               AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                       +y+G+r+++ +g+W+AeIrdps+     r++lg+++taeeAa+a++a ++k++g
  TRIDC5AG034820.2 102 QYRGIRQRP-WGKWAAEIRDPSK---GVRVWLGTYDTAEEAARAYDAEARKIRG 151
                       69*******.**********965...4*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 365 aa     Download sequence    
AAAKAAAAKK KQQQRSVTAD SLWPGLRKKA ADEEDFEADF REFERDSSDD DAAVEEVPPP  60
PAAAGFAFAA AAEVAPPAPA RLDAVQHDGP AVKQVKRVRK NQYRGIRQRP WGKWAAEIRD  120
PSKGVRVWLG TYDTAEEAAR AYDAEARKIR GKKAKVNFPE DAPTVQKSTL KPTAAKSAKL  180
APPPKACEDE PFNHVSRGDN DLFAMFAFND KKVPAKPAES VDSLLSVKLK PLVPTETFGM  240
NMLSDQSSNS FGSTDFGWDD EAMTPDYTSV FVPNAAMPAY VEPAYLQGGA PKRLRNNFGV  300
AVLPQGNGAQ DIPAFDHEMK YSLPYVESSS DGSMDSLLLN GAMQNGASSG DLWSLDELFM  360
AAGGY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G53910.38e-29ERF family protein