PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG035520.5
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 73aa    MW: 8359.35 Da    PI: 9.9872
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG035520.5genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP252.21.5e-162572151
               AP2  1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaark 51
                      s+y+GV +++ +grW+A+I   +   g +k+ +lg++ t eeAa a++ a+ 
  TRIDC5AG035520.5 25 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYATQEEAAMAYDMAAI 72
                      89****99**********99966...3.6********************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 73 aa     Download sequence    
MEGQSREEYI GSLRRKSSGF SRGVSKYRGV ARHHHNGRWE ARIGRVFGNK YLYLGTYATQ  60
EEAAMAYDMA AIE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G16060.27e-41ERF family protein