PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG036080.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 448aa MW: 45035.4 Da PI: 6.7422

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG036080.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	37	6.2e-12	246	291	5	55
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h+++Er RR+ri +++ L+el+P+a K +Ka++L + ++Y+k Lq TRIDC5AG036080.2 246 HSIAERLRRERIAERMKALQELVPNA-----NKTDKASMLDEIIDYVKFLQ 291 99*********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 448 aa Download sequence
MAAAGQISLD DLRGGHAGGN NGGAGGVHDD FLDQMFGSLP PSAWHDLAAG AKPEDGGQGE 60 GMQQQQQQQL FGGPYDDSVM LASRLRQHQI SGGPGGAAAS AKQMVLQQLA DLRQGHHSNM 120 LLQGMGRSPS IGGGGGEGGL LLPLTLGNGG SGGDVQALLK AAANSAGGDA GVFGGFIGSL 180 QQQQHFQPHP QQQTAPMPSQ TFGRAGGAPG GGAQPQQQAG GGGGGGPPAP PRQRVRARRG 240 QATDPHSIAE RLRRERIAER MKALQELVPN ANKTDKASML DEIIDYVKFL QLQVKVLSMS 300 RLGGAAAVAP LVADMSSEGR GGAAAGAADG SDGLTVTEQQ VAKLMEEDMG AAMQYLQGKG 360 LCLMPVSLAS AISSATCQLR PPAAAAGGPF TAAQHMSAAM RMGVGDGGVP ASPSMSVLTA 420 QSAMANGGAC ANDGEGSHPK DTASVSKP

Sequence ? help Back to Top

Protein Sequence Length: 448 aa Download sequence

MAAAGQISLD DLRGGHAGGN NGGAGGVHDD FLDQMFGSLP PSAWHDLAAG AKPEDGGQGE  60
GMQQQQQQQL FGGPYDDSVM LASRLRQHQI SGGPGGAAAS AKQMVLQQLA DLRQGHHSNM  120
LLQGMGRSPS IGGGGGEGGL LLPLTLGNGG SGGDVQALLK AAANSAGGDA GVFGGFIGSL  180
QQQQHFQPHP QQQTAPMPSQ TFGRAGGAPG GGAQPQQQAG GGGGGGPPAP PRQRVRARRG  240
QATDPHSIAE RLRRERIAER MKALQELVPN ANKTDKASML DEIIDYVKFL QLQVKVLSMS  300
RLGGAAAVAP LVADMSSEGR GGAAAGAADG SDGLTVTEQQ VAKLMEEDMG AAMQYLQGKG  360
LCLMPVSLAS AISSATCQLR PPAAAAGGPF TAAQHMSAAM RMGVGDGGVP ASPSMSVLTA  420
QSAMANGGAC ANDGEGSHPK DTASVSKP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	251	256	RLRRER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G24260.1	1e-46	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG036080.2