PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG036610.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 346aa    MW: 35812.9 Da    PI: 5.271
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG036610.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH43.17.7e-14130176354
                       HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
               HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                       r+h+e+ErrRR+riN  +++Lr+llP+      +K +Ka+ L ++ e++k+L
  TRIDC5AG036610.1 130 RSHSEAERRRRQRINGHLARLRSLLPNT-----TKTDKASLLAEVLEHVKEL 176
                       78*************************9.....8****************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 346 aa     Download sequence    
PRSQPGAADG DMWEGGVHGS HQDAARLLPP WLGGGPAAFA DPVGAAVGAG FGGYACDVVG  60
QAGGVFGFGF EAAVVAAQQQ HQQQRAAEAA AAAAGGSKAV VSGLLGSLQA ELGRMNAGEI  120
MDAKALAASR SHSEAERRRR QRINGHLARL RSLLPNTTKT DKASLLAEVL EHVKELKRQT  180
SAMTMMAAAV GGGEDDDAAP VQMLPTEADE LGVDAAEDGD GRLVVRASLC CEDRPDLIPD  240
IIRALAALRL RAHRAEITTL GGRVRSVLLI TAEEGEEGAD EGGDGIDEEC AASHRRHECI  300
ASVQEALRGV MDRRAACSND TSSSGGGGGS IKRQRMNYGA HEQCSV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68810.11e-50bHLH family protein