PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG036880.5

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

HD-ZIP

Protein Properties

Length: 83aa MW: 9577.24 Da PI: 12.201

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG036880.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	59.6	5.1e-19	1	53	2	54
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRak 54 rk+ +++keq Lee F+++++++ +++ LAk+l+L rqV vWFqNrRa+ TRIDC5AG036880.5 1 RKKLRLSKEQAAFLEESFKEHSTLNPRQKVALAKQLNLRPRQVEVWFQNRRAR 53 677889**********************************************9 PP
2	HD-ZIP_I/II	87.5	1.7e-28	1	54	1	54
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARt 54 +kk+rlskeq+++LEesF+e+++L+p++Kv+la++L+l+prqv+vWFqnrRAR TRIDC5AG036880.5 1 RKKLRLSKEQAAFLEESFKEHSTLNPRQKVALAKQLNLRPRQVEVWFQNRRARC 54 69***************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 83 aa Download sequence
RKKLRLSKEQ AAFLEESFKE HSTLNPRQKV ALAKQLNLRP RQVEVWFQNR RARCGAMKSF 60 SFPAPLSLSS RPRILAGQAK TIK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06710.1	7e-30	HD-ZIP family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG036880.5