PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG037590.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family HSF
Protein Properties Length: 279aa    MW: 30216.8 Da    PI: 9.8984
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG037590.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind104.21.1e-32121072103
                       HHHHHHHHHCTGGGTTTSEES.SSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHT..TEEE---SSBTTTTXTTSEEEEESXXXXXXX CS
      HSF_DNA-bind   2 Flkklyeiledeelkelisws.engnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmY..gFkkvkdeekkskskekiweFkhksFkkgkk 91 
                       Fl+k+y++++d+++++++sw  ++ ++fvv+ + efa+++Lp+yFkh+nf+SFvRQLn+Y  gF+kv  e+         weF+++ F+kg+k
  TRIDC5AG037590.2  12 FLTKTYQLVDDPATDHIVSWGdDRVSTFVVWRPPEFARDILPNYFKHNNFSSFVRQLNTYvsGFRKVVPER---------WEFANEFFRKGEK 95 
                       9********************6667***********************************999****9999.........************* PP

                       XXXXXXXXXXXX CS
      HSF_DNA-bind  92 ellekikrkkse 103
                       +ll++i+r+k++
  TRIDC5AG037590.2  96 QLLCEIHRRKTS 107
                       *********975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    
QAAAQKAVPA PFLTKTYQLV DDPATDHIVS WGDDRVSTFV VWRPPEFARD ILPNYFKHNN  60
FSSFVRQLNT YVSGFRKVVP ERWEFANEFF RKGEKQLLCE IHRRKTSGST TSSSPPPFFA  120
PPHFPLFHPG PHWRDQGAPR LLALGGPAAP SPGADGNGRA SSAAVLMDEN ERLRRSNTAL  180
LQELSHMRKL YNDIIYFVQN HVRPVAPSPA AATFLQGLGN GMQPRKMPPA STGAGNGLNT  240
SGGSTTSSSS LTIADELSPP PNHLSAEKSG GEAGSSSAA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G46264.11e-60HSF family protein