PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG037620.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family HSF
Protein Properties Length: 298aa    MW: 32144.2 Da    PI: 9.9626
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG037620.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind102.44.1e-32271182102
                       HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXX CS
      HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkell 94 
                       Fl+k+++++e++ ++e+isw e+g+sfvv+++ e+a+++Lp +Fkh nf+SFvRQLn+YgF+kv  ++         weF++++F++g++ ll
  TRIDC5AG037620.2  27 FLTKTHQMVEERGTDEVISWGEQGRSFVVWKPVELARDLLPLHFKHCNFSSFVRQLNTYGFRKVVPDR---------WEFANENFRRGEQGLL 110
                       9*****************************************************************99.........**************** PP

                       XXXXXXXX CS
      HSF_DNA-bind  95 ekikrkks 102
                       + i+r+k 
  TRIDC5AG037620.2 111 SGIRRRKA 118
                       ******97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 298 aa     Download sequence    
MAGAAAQQQQ QKGGGAVRVG GGGPAPFLTK THQMVEERGT DEVISWGEQG RSFVVWKPVE  60
LARDLLPLHF KHCNFSSFVR QLNTYGFRKV VPDRWEFANE NFRRGEQGLL SGIRRRKATA  120
TTTTPQSSKT SGTGVNVAFP PPLPALRPAS ASTSGTGNDH SSSSASSPTR PDLSSENEQL  180
RKDNHALAAE LALARRHCEE LLGFLSRFLD VRQLDLRLLM DGDMQGAAGA GGARSADQEH  240
CCEKKVKLFG VILKDASARK RGRCDEAAAS ERSMKMTRIG EPWVGVPSSC PARCGGGN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G46264.12e-44HSF family protein