PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG038490.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 203aa    MW: 22151.9 Da    PI: 8.524
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG038490.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH42.11.5e-132470354
                      HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
               HLH  3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                      r+h+e+Er+RR+riN+ +++Lr+llP+a       ++Ka+ L ++v+++++L
  TRIDC5AG038490.1 24 RSHSEAERKRRQRINTHLATLRSLLPSA-----SQMDKAALLGEVVRHVREL 70
                      78*************************9.....68**************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 203 aa     Download sequence    
EEAEAEVEMD DQRSTPARGA RTSRSHSEAE RKRRQRINTH LATLRSLLPS ASQMDKAALL  60
GEVVRHVREL RGDADGGAVA GVAVPGERDE VGVEEERWDA RESAKRVRAW VCCADRPGLM  120
SELGRAVRSV SARAVRAEIA TVGGRTRSVL ELEAGQAAGA SRPALHAALR AVLLSREDEL  180
LAVEGYKRQR FSALISQAWL CNH
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13035ERKRRQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56770.13e-20bHLH family protein