PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG038820.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 290aa    MW: 30615.3 Da    PI: 4.5418
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG038820.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH45.11.8e-1473124155
                       CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       +r++h ++Er+RR+++N+ ++ Lr+l+P++   ++++ + a+i+  A++++k+L+
  TRIDC5AG038820.3  73 QRMTHIAVERNRRKQMNEYLAALRSLMPPS---YAQRGDQASIVGGAINFVKELE 124
                       79****************************...*******************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 290 aa     Download sequence    
GLFGGGEGLA GLDGGDWDAA VAAACSSMLL PQAAFQELDI SAVAATAAPQ EESGGRGEMS  60
AAGVGQDDAA ESQRMTHIAV ERNRRKQMNE YLAALRSLMP PSYAQRGDQA SIVGGAINFV  120
KELEQLLQTL ETHRQARERA AAVDGGEAPP PPFANFFTFP QYSMSATPAP APAPPANNDE  180
GADGCAEAEA SGSKPSAVAD VEVTMVESHA NLRMLSRRRP RQLLRLLVGL QGHRLTVLHL  240
NMSSAGHMVL YSLSLKVEDD CQLTSVDEIA TAAHQIVEKI QEEQELTAAA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17485RMTHIAVERNRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72210.15e-41bHLH family protein