PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG039080.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

C2H2

Protein Properties

Length: 1068aa MW: 116120 Da PI: 4.5402

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG039080.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.3	0.00012	301	323	2	23
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 +C++C+ +F ++s +++H+ + H TRIDC5AG039080.4 301 ECKKCNLTFEDQSAYVQHQLSfH 323 5******************9988 PP

Sequence ? help Back to Top
Protein Sequence Length: 1068 aa Download sequence
IDRAVFNESA GSRKQTFSRR RAATNLPHNL TPTTASSSAV AAPTEEDSEN RLIVFHLQQL 60 FARDDPSYLP PPPPIPLQQL PPIPIPAPTI PVPAPPVASV PIQQLPDPDR DLTNPKGVAV 120 DLARLAELVD PYGEEIRNRT AGLALESELL GFMNELEGQW GSRRRRRKFV EAAIFGDHLP 180 RGWKLILGIK RKERAAWINC RRYVSPRGHQ FATCREVSSY FMSLLGYVEA KPTTVQNNDV 240 EVRDLSAVNT AGLHQQNDST GDMQSAVSAT SVTLPIHNGD SQGQRQKPYK DEAPIEAVRK 300 ECKKCNLTFE DQSAYVQHQL SFHQRKAKRR KVDKSVGLGV GKDGKLETQE SQRTCEDKPG 360 YFDHGVADVK SQGQSPAELF GGASSGDVGA QLSLAAAPCG LQEITGLPEQ AEEPSAGEPV 420 SGHQKDLPQE TTGLPQQEKA LSATEPFAGH QKEHVDNSGD HEIHDGACHI AEEPLAFDVA 480 SNLGTCKSPE PEVHEHDSSK DLEFSIADCS GSFDRSHEIS KIPQDVPCTT DAPGEKSCAD 540 DPMDCADITL PKQVPEHCDM LDHKFRGFPG ETGFNDQVEN NPLSANLDEP DLSSNSMEVD 600 NSKIACKFGD VLNSTSSEYD KPVVDQTDRG VTALKNDAIN IDDGMNIDVR IKEVNLNSCL 660 DTISSPVSGA NCETSNALHD GNRSSILAQC FGASSNDDNV CQDESFVNQN NVSKAEIFVN 720 QSNDMVYQSN LNMNPVSPPQ ISVDYFTNCS MNSEIKNNDN RRDDNAKEQF VNSRNISSNE 780 PGFDAEAYNN DIFTGAMAET SFAQLNNAMN MKTDYSSCYS ISDLNTLTGG TGTDGIDFHG 840 MRSSFVSGST SRSEPNELDF DIKGSMLEAL ERSDSDLETQ YNGGDPAIDS LPAAGTSGTS 900 VDDFMSMHTN FGSLTSLVRS VEGGPMSRLI QDQCDLQLGF GAQKQQIYPS FEEHLRMASA 960 GAPQFGNMGR HNPMPVPVPV PEPTLMLGYE PTLMLGYAPQ FGSCPPVQLG WDLSKMVGVL 1020 QSVCVWCNTR FQHFGTAEQQ NDSVGFICPA CKDKTSGHLG TLNNGSLL

Sequence ? help Back to Top

Protein Sequence Length: 1068 aa Download sequence

IDRAVFNESA GSRKQTFSRR RAATNLPHNL TPTTASSSAV AAPTEEDSEN RLIVFHLQQL  60
FARDDPSYLP PPPPIPLQQL PPIPIPAPTI PVPAPPVASV PIQQLPDPDR DLTNPKGVAV  120
DLARLAELVD PYGEEIRNRT AGLALESELL GFMNELEGQW GSRRRRRKFV EAAIFGDHLP  180
RGWKLILGIK RKERAAWINC RRYVSPRGHQ FATCREVSSY FMSLLGYVEA KPTTVQNNDV  240
EVRDLSAVNT AGLHQQNDST GDMQSAVSAT SVTLPIHNGD SQGQRQKPYK DEAPIEAVRK  300
ECKKCNLTFE DQSAYVQHQL SFHQRKAKRR KVDKSVGLGV GKDGKLETQE SQRTCEDKPG  360
YFDHGVADVK SQGQSPAELF GGASSGDVGA QLSLAAAPCG LQEITGLPEQ AEEPSAGEPV  420
SGHQKDLPQE TTGLPQQEKA LSATEPFAGH QKEHVDNSGD HEIHDGACHI AEEPLAFDVA  480
SNLGTCKSPE PEVHEHDSSK DLEFSIADCS GSFDRSHEIS KIPQDVPCTT DAPGEKSCAD  540
DPMDCADITL PKQVPEHCDM LDHKFRGFPG ETGFNDQVEN NPLSANLDEP DLSSNSMEVD  600
NSKIACKFGD VLNSTSSEYD KPVVDQTDRG VTALKNDAIN IDDGMNIDVR IKEVNLNSCL  660
DTISSPVSGA NCETSNALHD GNRSSILAQC FGASSNDDNV CQDESFVNQN NVSKAEIFVN  720
QSNDMVYQSN LNMNPVSPPQ ISVDYFTNCS MNSEIKNNDN RRDDNAKEQF VNSRNISSNE  780
PGFDAEAYNN DIFTGAMAET SFAQLNNAMN MKTDYSSCYS ISDLNTLTGG TGTDGIDFHG  840
MRSSFVSGST SRSEPNELDF DIKGSMLEAL ERSDSDLETQ YNGGDPAIDS LPAAGTSGTS  900
VDDFMSMHTN FGSLTSLVRS VEGGPMSRLI QDQCDLQLGF GAQKQQIYPS FEEHLRMASA  960
GAPQFGNMGR HNPMPVPVPV PEPTLMLGYE PTLMLGYAPQ FGSCPPVQLG WDLSKMVGVL  1020
QSVCVWCNTR FQHFGTAEQQ NDSVGFICPA CKDKTSGHLG TLNNGSLL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	163	192	RRRRRKFVEAAIFGDHLPRGWKLILGIKRK
2	164	193	RRRRRKFVEAAIFGDHLPRGWKLILGIKRK
3	165	194	RRRRRKFVEAAIFGDHLPRGWKLILGIKRK
4	324	331	QRKAKRRK

Link Out ? help Back to Top
Ensembl	TRIDC5AG039080.4