PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG039080.8

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

C2H2

Protein Properties

Length: 671aa MW: 72420.8 Da PI: 4.216

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG039080.8	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15.1	6.8e-05	39	61	2	23
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 +C++C+ +F ++s +++H+ + H TRIDC5AG039080.8 39 ECKKCNLTFEDQSAYVQHQLSfH 61 5******************9988 PP

Sequence ? help Back to Top
Protein Sequence Length: 671 aa Download sequence
MQSAVSATSV TLPIHNGDSQ GQRQKPYKDE APIEAVRKEC KKCNLTFEDQ SAYVQHQLSF 60 HQRKAKRRKV DKSVGLGVGK DGKLETQESQ RTCEDKPGYF DHGVADVKSQ GQSPAELFGG 120 ASSGDVGAQL SLAAAPCGLQ EITGLPEQAE EPSAGEPVSG HQKDLPQETT GLPQQEKALS 180 ATEPFAGHQK EHVDNSGDHE IHDGACHIAE EPLAFDVASN LGTCKSPEPE VHEHDSSKDL 240 EFSIADCSGS FDRSHEISKI PQDVPCTTDA PGEKSCADDP MDCADITLPK QVPEHCDMLD 300 HKFRGFPGET GFNDQVENNP LSANLDEPDL SSNSMEVDNS KIACKFGDVL NSTSSEYDKP 360 VVDQTDRGVT ALKNDAINID DGMNIDVRIK EVNLNSCLDT ISSPVSGANC ETSNALHDGN 420 RSSILAQCFG ASSNDDNVCQ DESFVNQNNV SKAEIFVNQS NDMVYQSNLN MNPVSPPQIS 480 VDYFTNCSMN SEIKNNDNRR DDNAKEQFVN SRNISSNEPG FDAEAYNNDI FTGAMAETSF 540 AQLNNAMNMK TDYSSCYSIS DLNTLTGGTG TDGIDFHGMR SSFVSGSTSR SEPNELDFDI 600 KGSMLEALER SDSDLETQYN GGDPAIDSLP AAGTSGTSVD DFMSMHTNFG SLTSLVRSVE 660 GGPMSRLIQD Q

Sequence ? help Back to Top

Protein Sequence Length: 671 aa Download sequence

MQSAVSATSV TLPIHNGDSQ GQRQKPYKDE APIEAVRKEC KKCNLTFEDQ SAYVQHQLSF  60
HQRKAKRRKV DKSVGLGVGK DGKLETQESQ RTCEDKPGYF DHGVADVKSQ GQSPAELFGG  120
ASSGDVGAQL SLAAAPCGLQ EITGLPEQAE EPSAGEPVSG HQKDLPQETT GLPQQEKALS  180
ATEPFAGHQK EHVDNSGDHE IHDGACHIAE EPLAFDVASN LGTCKSPEPE VHEHDSSKDL  240
EFSIADCSGS FDRSHEISKI PQDVPCTTDA PGEKSCADDP MDCADITLPK QVPEHCDMLD  300
HKFRGFPGET GFNDQVENNP LSANLDEPDL SSNSMEVDNS KIACKFGDVL NSTSSEYDKP  360
VVDQTDRGVT ALKNDAINID DGMNIDVRIK EVNLNSCLDT ISSPVSGANC ETSNALHDGN  420
RSSILAQCFG ASSNDDNVCQ DESFVNQNNV SKAEIFVNQS NDMVYQSNLN MNPVSPPQIS  480
VDYFTNCSMN SEIKNNDNRR DDNAKEQFVN SRNISSNEPG FDAEAYNNDI FTGAMAETSF  540
AQLNNAMNMK TDYSSCYSIS DLNTLTGGTG TDGIDFHGMR SSFVSGSTSR SEPNELDFDI  600
KGSMLEALER SDSDLETQYN GGDPAIDSLP AAGTSGTSVD DFMSMHTNFG SLTSLVRSVE  660
GGPMSRLIQD Q

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	62	69	QRKAKRRK

Link Out ? help Back to Top
Ensembl	TRIDC5AG039080.8