PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG039280.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 505aa MW: 53981.8 Da PI: 8.3476

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG039280.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	54.1	2.8e-17	220	269	2	55
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 + +h++ E+rRR++iN++f+ Lr+llP+ ++K +Ka+ L +++eYI+ Lq TRIDC5AG039280.2 220 KSKHSATEQRRRSKINDRFQILRDLLPHT----DQKRDKATFLLEVIEYIRFLQ 269 578***********************8....8*****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 505 aa Download sequence
RVCAGNKATH DFLSLYAPAA AAAAAAKDSS LQLHDSKPPA ASQGFFLKTH DFLQPLEKPA 60 ASAPSGAERQ PQTTKHALPG GIGTFSVSQQ APGAAGPLPA ATAAVVVKPE PPAFVLWGQP 120 TASQPPRAQG HHHQWTLPYA GAGQAATASR KHPAERKRRG GGWFMDSGSR SSGGAGFDDD 180 DGLAARREVS SSLQELAVRV DAKGGSCSGS GTDQLPNTPK SKHSATEQRR RSKINDRFQI 240 LRDLLPHTDQ KRDKATFLLE VIEYIRFLQE KAQKYEASFP EWNQENAKLL PWSNMYFRSS 300 WKNAQSKGQI AEDASPDPSQ FIRNGASPGF NITGKLDDNH TAVASAAISG APDQAETDHM 360 ASVSCRSADT PTNIMNNVSP QSQPQWADPS GVDDCAVNSG LLNNQQLMID EGTISVSSQY 420 SQELLNTLTH ALQSSGIDLS QANISVQINL GKRAVKRPTA GQSSSFKEHT DLGPTNNMMG 480 HQQAMLGNAT EELPHATKRY KPGNT

Sequence ? help Back to Top

Protein Sequence Length: 505 aa Download sequence

RVCAGNKATH DFLSLYAPAA AAAAAAKDSS LQLHDSKPPA ASQGFFLKTH DFLQPLEKPA  60
ASAPSGAERQ PQTTKHALPG GIGTFSVSQQ APGAAGPLPA ATAAVVVKPE PPAFVLWGQP  120
TASQPPRAQG HHHQWTLPYA GAGQAATASR KHPAERKRRG GGWFMDSGSR SSGGAGFDDD  180
DGLAARREVS SSLQELAVRV DAKGGSCSGS GTDQLPNTPK SKHSATEQRR RSKINDRFQI  240
LRDLLPHTDQ KRDKATFLLE VIEYIRFLQE KAQKYEASFP EWNQENAKLL PWSNMYFRSS  300
WKNAQSKGQI AEDASPDPSQ FIRNGASPGF NITGKLDDNH TAVASAAISG APDQAETDHM  360
ASVSCRSADT PTNIMNNVSP QSQPQWADPS GVDDCAVNSG LLNNQQLMID EGTISVSSQY  420
SQELLNTLTH ALQSSGIDLS QANISVQINL GKRAVKRPTA GQSSSFKEHT DLGPTNNMMG  480
HQQAMLGNAT EELPHATKRY KPGNT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69010.1	6e-61	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG039280.2