PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG039280.5

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 409aa MW: 44159.9 Da PI: 8.4976

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG039280.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	54.5	2.1e-17	156	205	2	55
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 + +h++ E+rRR++iN++f+ Lr+llP+ ++K +Ka+ L +++eYI+ Lq TRIDC5AG039280.5 156 KSKHSATEQRRRSKINDRFQILRDLLPHT----DQKRDKATFLLEVIEYIRFLQ 205 578***********************8....8*****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 409 aa Download sequence
PSHVNSRLPA HSYPCATGTR TSSPRILGVP TGVWATFFCF VPCRCWVKGR DRAKGVPVSV 60 VHLAGHHHQW TLPYAGAGQA ATASRKHPAE RKRRGGGWFM DSGSRSSGGA GFDDDDGLAA 120 RREVSSSLQA ELAVRVDAKG GSCSGSGTDQ LPNTPKSKHS ATEQRRRSKI NDRFQILRDL 180 LPHTDQKRDK ATFLLEVIEY IRFLQEKAQK YEASFPEWNQ ENAKLLPWSK GQIAEDASPD 240 PSQFIRNGAS PGFNITGKLD DNHTAVASAA ISGAPDQAET DHMASVSCRS ADTPTNIMNN 300 VSPQSQPQWA DPSGVDDCAV NSGLLNNQQL MIDEGTISVS SQYSQELLNT LTHALQSSGI 360 DLSQANISVQ INLGKRAVKR PTAGQSSRAH RPRPDEQHDG PSAGDAGQR

Sequence ? help Back to Top

Protein Sequence Length: 409 aa Download sequence

PSHVNSRLPA HSYPCATGTR TSSPRILGVP TGVWATFFCF VPCRCWVKGR DRAKGVPVSV  60
VHLAGHHHQW TLPYAGAGQA ATASRKHPAE RKRRGGGWFM DSGSRSSGGA GFDDDDGLAA  120
RREVSSSLQA ELAVRVDAKG GSCSGSGTDQ LPNTPKSKHS ATEQRRRSKI NDRFQILRDL  180
LPHTDQKRDK ATFLLEVIEY IRFLQEKAQK YEASFPEWNQ ENAKLLPWSK GQIAEDASPD  240
PSQFIRNGAS PGFNITGKLD DNHTAVASAA ISGAPDQAET DHMASVSCRS ADTPTNIMNN  300
VSPQSQPQWA DPSGVDDCAV NSGLLNNQQL MIDEGTISVS SQYSQELLNT LTHALQSSGI  360
DLSQANISVQ INLGKRAVKR PTAGQSSRAH RPRPDEQHDG PSAGDAGQR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69010.1	9e-61	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG039280.5