PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG040090.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NF-YC
Protein Properties Length: 143aa    MW: 15846.1 Da    PI: 5.2554
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG040090.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC168.77.2e-5311032101
             NF-YC   2 lksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdf 91 
                       l++fw++q   ie +tdfknh+lPlarikki+kadedv+mi+aeaPv++++ace+filelt r w haeenkrrtl+ksdiaaa++rt++fdf
  TRIDC5AG040090.4   1 LQVFWAEQyreIEATTDFKNHNLPLARIKKIMKADEDVRMIAAEAPVVFARACEMFILELTHRGWAHAEENKRRTLQKSDIAAAIARTEVFDF 93 
                       799****99999********************************************************************************* PP

             NF-YC  92 lvdivprdel 101
                       lvdivprd+ 
  TRIDC5AG040090.4  94 LVDIVPRDDA 103
                       *******986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 143 aa     Download sequence    
LQVFWAEQYR EIEATTDFKN HNLPLARIKK IMKADEDVRM IAAEAPVVFA RACEMFILEL  60
THRGWAHAEE NKRRTLQKSD IAAAIARTEV FDFLVDIVPR DDAKDAEAAA AAAMATAAAG  120
IPRPAAGVPA TDPSMAYYYV PQQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17379RRTLQKS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G56170.18e-60NF-YC family protein