PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG041100.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NAC

Protein Properties

Length: 695aa MW: 76345.9 Da PI: 4.4451

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG041100.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	144.6	5.4e-45	9	134	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 ppGfrF+Ptdeelv ++Lk++v++ + + i++vd+yk++P++Lp+ ++++++k+w+f s+ d+ky++g+r++r+t++gyWkatgkd+++ TRIDC5AG041100.2 9 PPGFRFSPTDEELVLFFLKRRVAAGRPSP--YIADVDVYKSHPSHLPErsALRTGDKQWFFCSRLDRKYPNGSRASRTTADGYWKATGKDRSI 99 8*******************9999655..6**********94357788999******************************** PP NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrl 128 ++ g++vg kktLv+++grap+ge+tdWvmhey++ TRIDC5AG041100.2 100 CN-AGRAVGNKKTLVYHHGRAPRGERTDWVMHEYTI 134 .999****************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 695 aa Download sequence
TPPPPPRWPP GFRFSPTDEE LVLFFLKRRV AAGRPSPYIA DVDVYKSHPS HLPERSALRT 60 GDKQWFFCSR LDRKYPNGSR ASRTTADGYW KATGKDRSIC NAGRAVGNKK TLVYHHGRAP 120 RGERTDWVMH EYTILADALP PPARGRESYA LYKLFEKSGV GPKNGEQYGA PFREEDWLDD 180 DDDCEPPADP IPIAVSLPTR TVTIGVMTVD DQIGDLEVFL LQNGDDQGNS EPQSDFSTPV 240 SSQAPLQHGH PQGRPSDDGN TSEVADATTS SRGMVMAENT CTELPFGDLE GLLMEISDDQ 300 RATKSFQEFS EFVPQLQLQH DDHEHEAWPN ANMEEISVAD YTTSNGVVDA SGCTVTELPY 360 EDIEGLLLQL ENDQGNVQPL ADFSTPVPRH EFHQVGSGDF HGCHGATFSS IDPSSAVQEN 420 RDLDPRSDPS NQITQSALTN MPLNWETDCT EETSAMRSVS GLASYDGQDA DEEFLEINDF 480 LDPEDVGQQS MNCTATEHLI SSSNGMFDSL EFADASMFLP GSFDTAGVAT ENQFGYLGDS 540 GSQNQGLQYT SESWTHNQVA LNVRNHMNHN HVVFSHASGT ANFHTVNEQP HNLSPADSQS 600 WFNSAVSALL DAVPANPALA AENNVLNRTL QRISSFRSEQ APKEEASAPV IQVRRRRAGL 660 ISVSLLVLLA AILWTFAAGT GYAIKFCKGL WKSST

Sequence ? help Back to Top

Protein Sequence Length: 695 aa Download sequence

TPPPPPRWPP GFRFSPTDEE LVLFFLKRRV AAGRPSPYIA DVDVYKSHPS HLPERSALRT  60
GDKQWFFCSR LDRKYPNGSR ASRTTADGYW KATGKDRSIC NAGRAVGNKK TLVYHHGRAP  120
RGERTDWVMH EYTILADALP PPARGRESYA LYKLFEKSGV GPKNGEQYGA PFREEDWLDD  180
DDDCEPPADP IPIAVSLPTR TVTIGVMTVD DQIGDLEVFL LQNGDDQGNS EPQSDFSTPV  240
SSQAPLQHGH PQGRPSDDGN TSEVADATTS SRGMVMAENT CTELPFGDLE GLLMEISDDQ  300
RATKSFQEFS EFVPQLQLQH DDHEHEAWPN ANMEEISVAD YTTSNGVVDA SGCTVTELPY  360
EDIEGLLLQL ENDQGNVQPL ADFSTPVPRH EFHQVGSGDF HGCHGATFSS IDPSSAVQEN  420
RDLDPRSDPS NQITQSALTN MPLNWETDCT EETSAMRSVS GLASYDGQDA DEEFLEINDF  480
LDPEDVGQQS MNCTATEHLI SSSNGMFDSL EFADASMFLP GSFDTAGVAT ENQFGYLGDS  540
GSQNQGLQYT SESWTHNQVA LNVRNHMNHN HVVFSHASGT ANFHTVNEQP HNLSPADSQS  600
WFNSAVSALL DAVPANPALA AENNVLNRTL QRISSFRSEQ APKEEASAPV IQVRRRRAGL  660
ISVSLLVLLA AILWTFAAGT GYAIKFCKGL WKSST

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34180.1	6e-60	NAC family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG041100.2