PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG041100.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NAC

Protein Properties

Length: 730aa MW: 80026 Da PI: 4.3447

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG041100.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	144.5	5.8e-45	11	136	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 ppGfrF+Ptdeelv ++Lk++v++ + + i++vd+yk++P++Lp+ ++++++k+w+f s+ d+ky++g+r++r+t++gyWkatgkd+++ TRIDC5AG041100.4 11 PPGFRFSPTDEELVLFFLKRRVAAGRPSP--YIADVDVYKSHPSHLPErsALRTGDKQWFFCSRLDRKYPNGSRASRTTADGYWKATGKDRSI 101 8*******************9999655..6**********94357788999******************************** PP NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrl 128 ++ g++vg kktLv+++grap+ge+tdWvmhey++ TRIDC5AG041100.4 102 CN-AGRAVGNKKTLVYHHGRAPRGERTDWVMHEYTI 136 .999****************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 730 aa Download sequence
METPPPPPRW PPGFRFSPTD EELVLFFLKR RVAAGRPSPY IADVDVYKSH PSHLPERSAL 60 RTGDKQWFFC SRLDRKYPNG SRASRTTADG YWKATGKDRS ICNAGRAVGN KKTLVYHHGR 120 APRGERTDWV MHEYTILADA LPPPARGRES YALYKLFEKS GVGPKNGEQY GAPFREEDWL 180 DDDDDCEPPA DPIPIAVSLP TRTVTVVEQI GDVLTVDDQI GDVLTVVDQI GGVAVDKQIG 240 VMTVDDQIGD LEVFLLQNGD DQGNSEPQSD FSTPVSSQAP LQHGHPQGRP SDDGNTSEVA 300 DATTSSRGMV MAENTCTELP FGDLEGLLME ISDDQRATKS FQEFSEFVPQ LQLQHDDHEH 360 EAWPNANMEE ISVADYTTSN GVVDASGCTV TELPYEDIEG LLLQLENDQG NVQPLADFST 420 PVPRHEFHQV GSGDFHGCHG ATFSSIDPSS AVQENRDLDP RSDPSNQITQ SALTNMPLNW 480 ETDCTEETSA MRSVSGLASY DGQDADEEFL EINDFLDPED VGQQSMNCTA TEHLISSSNG 540 MFDSLEFADA SMFLPGSFDT AGVATENQFG YLGDSGSQNQ GLQYTSESWT HNQVALNVRN 600 HMNHNHVVFS HASGTANFHT VNEQPHNLSP ADSQSWFNSA VSALLDAVPA NPALAAENNV 660 LNRTLQRISS FRSEQAPKEE ASAPVIQVRR RRAGLISVSL LVLLAAILWT FAAGTGYAIK 720 FCKGLWKSST

Sequence ? help Back to Top

Protein Sequence Length: 730 aa Download sequence

METPPPPPRW PPGFRFSPTD EELVLFFLKR RVAAGRPSPY IADVDVYKSH PSHLPERSAL  60
RTGDKQWFFC SRLDRKYPNG SRASRTTADG YWKATGKDRS ICNAGRAVGN KKTLVYHHGR  120
APRGERTDWV MHEYTILADA LPPPARGRES YALYKLFEKS GVGPKNGEQY GAPFREEDWL  180
DDDDDCEPPA DPIPIAVSLP TRTVTVVEQI GDVLTVDDQI GDVLTVVDQI GGVAVDKQIG  240
VMTVDDQIGD LEVFLLQNGD DQGNSEPQSD FSTPVSSQAP LQHGHPQGRP SDDGNTSEVA  300
DATTSSRGMV MAENTCTELP FGDLEGLLME ISDDQRATKS FQEFSEFVPQ LQLQHDDHEH  360
EAWPNANMEE ISVADYTTSN GVVDASGCTV TELPYEDIEG LLLQLENDQG NVQPLADFST  420
PVPRHEFHQV GSGDFHGCHG ATFSSIDPSS AVQENRDLDP RSDPSNQITQ SALTNMPLNW  480
ETDCTEETSA MRSVSGLASY DGQDADEEFL EINDFLDPED VGQQSMNCTA TEHLISSSNG  540
MFDSLEFADA SMFLPGSFDT AGVATENQFG YLGDSGSQNQ GLQYTSESWT HNQVALNVRN  600
HMNHNHVVFS HASGTANFHT VNEQPHNLSP ADSQSWFNSA VSALLDAVPA NPALAAENNV  660
LNRTLQRISS FRSEQAPKEE ASAPVIQVRR RRAGLISVSL LVLLAAILWT FAAGTGYAIK  720
FCKGLWKSST

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34180.1	8e-60	NAC family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG041100.4