PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG041500.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NAC

Protein Properties

Length: 357aa MW: 39109 Da PI: 9.422

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG041500.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	177.5	3.5e-55	21	151	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lppGfrFhPtdeel+++yL+ k+++ +++ ++i+evd++k+ePwdLp+k+k +ekewyfFs rd+ky+tg r+nrat++gyWk+tgkdke++ TRIDC5AG041500.2 21 LPPGFRFHPTDEELITYYLRGKIADAGFTA-RAITEVDLNKCEPWDLPEKAKMGEKEWYFFSLRDRKYPTGVRTNRATNAGYWKTTGKDKEIF 112 79***********************999.89***********99999************************************ PP NAM 94 sk....kgelvglkktLvfykgrapkgektdWvmheyrl 128 + +elvg+kktLvfykgrap+gek++Wvmheyrl TRIDC5AG041500.2 113 TGqppsAQELVGMKKTLVFYKGRAPRGEKSNWVMHEYRL 151 9888877888*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 357 aa Download sequence
GGGEGAVSKK KSSKEGEEES LPPGFRFHPT DEELITYYLR GKIADAGFTA RAITEVDLNK 60 CEPWDLPEKA KMGEKEWYFF SLRDRKYPTG VRTNRATNAG YWKTTGKDKE IFTGQPPSAQ 120 ELVGMKKTLV FYKGRAPRGE KSNWVMHEYR LHLKPASKSN KDEWVVCRIF AKSPGVKKYP 180 SSTNAHSRSH HHPYTLDMVP QFLPTLLGHD LFGGGRGHHH PYMTPADLAE LSRFARGTPG 240 LHPHIQPHPA AAGYLNPPGP FTLSNLNLNL GGPSPQHALH HAMSMPMGQQ QQQQQAGGAN 300 GQAMTMEQHM AAGLGGVPAA GGDGGFGGEG HAAGGAGMRY QNLDVDQMVE RYWPGSY

Sequence ? help Back to Top

Protein Sequence Length: 357 aa Download sequence

GGGEGAVSKK KSSKEGEEES LPPGFRFHPT DEELITYYLR GKIADAGFTA RAITEVDLNK  60
CEPWDLPEKA KMGEKEWYFF SLRDRKYPTG VRTNRATNAG YWKTTGKDKE IFTGQPPSAQ  120
ELVGMKKTLV FYKGRAPRGE KSNWVMHEYR LHLKPASKSN KDEWVVCRIF AKSPGVKKYP  180
SSTNAHSRSH HHPYTLDMVP QFLPTLLGHD LFGGGRGHHH PYMTPADLAE LSRFARGTPG  240
LHPHIQPHPA AAGYLNPPGP FTLSNLNLNL GGPSPQHALH HAMSMPMGQQ QQQQQAGGAN  300
GQAMTMEQHM AAGLGGVPAA GGDGGFGGEG HAAGGAGMRY QNLDVDQMVE RYWPGSY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G24430.2	2e-86	NAC family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG041500.2